Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4690 ATGGATGTTGATTCTTCCATGGTGGCGGAGAACGATCACGGTTCAGCGGTGCAGAACAATGAAGAGAGAGAACAGATAGGGGAGACGCCGTCATCATCTTCTTCTGGCGGTGGATCTCCCGCGGAGCAACAACCGCAGCAGCAAGGTGCTGCTGCGGCTGCTCAGGCGCAGCATAGTCCAGTTGTTGGTCCGAGGCTTGCTCCGAGTTATACAGTTGTGGATGCGATTTTGGAGAAGAAGGATGATGGACCGGGGCCGCGGTGTGGTCATACGTTGACGGCTGTGCCTGCGGTGGGTGAGGATGGAACGCCTGGATACATTGGTCCGAGACTGATTTTATTCGGTGGTGCAACTGCACTTGAAGGGAATTCTGCTGCTTCAGGGACTCCTACTTCTGCAGGAAATGCAGGCATACGTTTAGCTGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCTCCAACCCCAAGGGCTGCACATGTGGCCACTGCTGTGGGCACGATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGATTATCGGCGGAGGACCTTCATGTTCTTGATCTCACACAGCAACGACCAAGATGGCATAGAGTTGGCGTTCCAGGGCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTAGACACAGCTGCCAAGCCCTATGAATGGCGCAAATTGGAGCCAGAAGGAGAGGGTCCGCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGTGGGAGGGATGCCAATAGCGTTCCGCTGGCTAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTTTCACCATCTTCAAGATATCAGCATGCAGCGGTGTTTGTTAATGCAAGACTCCATGTGTCTGGCGGGGCTCTTGGTGGAGGACGGATGGTAGAAGATTCATCTAGTGTAGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCAGTTGTTACCAGTCCAAGAACGGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCTTCCGTCGAGTTGGTCAGGCGTTGCAGGCATGCAGCGGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGTGGAGTCTTGCTGGATGACCTGCTTGTTGCTGAAGATCTTGCTGCTGCGGAAACAACAAGTGCTGCTTCGCATGCTGCTGCTGCAGCAGCTGCGTCTGATGTACAAATGGGACGACCAGGAGGATATGGATTTGTTGATGATAGAACAGGGCAAACAATGTCTGATGCGGCTGCTGACGGTGCAGTTGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAACGGTGACATGTACACTGATATCAGCACTGAAAATGCATTGCTTCAGGGATCTAGGAGAACTAGCAAAGGAGTTGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCGCGGCAAGAGAATGGAGAAGTTGAATCACCAGATCGGGATCGTGGGGCTGAGGCTACTCCTAGTGGGAAACAAATATCTTCCATGATTAAGCCTGAATCTGCAGGCCCAAATAGTATTGCTTCTGGTGGAGTCAGGCTGCATCATAGAGCTGTGGTTATTGCCGCAGAGACTGGTGGTGCACTAGGTGGCATGGTTAGGCAGCTTTCGATTGATCAGTTTGAAAATGAAGGTAGACGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAGTTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTCATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGACGACAGTTTTTCTTGGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCGGAGAGGATATTTTCTAGCGAACCAACTGTCATACAGCTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGCCTTTTTGATGAGTATGGTTCACCATCAACTGCCGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTGCTTGCTTTGAAGGTTGAGTATCCAAACAATGTTCACTTAATACGTGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGCATTGAGTGCATAGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCACCGGATAAATCGTCTGTTTAACTGGCTTCCTCTTGCCGCTCTAATTGAGAAAAAAATTATTTGCATGCACGGGGGTATTGGTCGTTCAATAAATCACTTGGAACAAATTGAGAATATTCAGCGTCCTATCACAATGGAAGCAGGATCAATTGTGCTGATGGATCTTTTGTGGTCTGATCCTACCGAGAATGACAGCGTGGAAGGTCTGCGACCAAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGTGTAATGGAATTTTGCAATAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTAATCACCCTTTTCTCAGCTACAAACTACTGCGGTACTGCAAATAATGCTGGAGCGATATTAGTTTTGGGGAGGGATCTTGTGGTGGTTCCTAAACTGATTCATCCATTACCACCAGCACTTTCTTCACCAGAAACATCACCAGAACGTCATATTGAAGATACTTGGATGCAGGAGTTGAATGCGAACAGACCACCAACTCCAACTAGAGGTCGTCCTCCAGGAGCAAATGACCGTGGTTCGCTGGCTTGGATATAG 3003 0.4865 MDVDSSMVAENDHGSAVQNNEEREQIGETPSSSSSGGGSPAEQQPQQQGAAAAAQAQHSPVVGPRLAPSYTVVDAILEKKDDGPGPRCGHTLTAVPAVGEDGTPGYIGPRLILFGGATALEGNSAASGTPTSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELVRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAASDVQMGRPGGYGFVDDRTGQTMSDAAADGAVVLGNPVAPPVNGDMYTDISTENALLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVESPDRDRGAEATPSGKQISSMIKPESAGPNSIASGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPETSPERHIEDTWMQELNANRPPTPTRGRPPGANDRGSLAWI* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4690 1000 PIRSF STPPP_BSU1 37 1000 IPR012391 GO:0004721|GO:0009742
Psa7g4690 1000 Pfam Galactose oxidase, central domain 86 167 - -
Psa7g4690 1000 Pfam Galactose oxidase, central domain 222 275 - -
Psa7g4690 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1000 - -
Psa7g4690 1000 ProSitePatterns Serine/threonine specific protein phosphatases signature. 766 771 IPR006186 GO:0016787
Psa7g4690 1000 Gene3D - 69 192 IPR015915 GO:0005515
Psa7g4690 1000 Gene3D - 193 451 IPR015915 GO:0005515
Psa7g4690 1000 MobiDBLite consensus disorder prediction 974 1000 - -
Psa7g4690 1000 Gene3D - 633 964 IPR029052 -
Psa7g4690 1000 SUPERFAMILY Metallo-dependent phosphatases 654 959 IPR029052 -
Psa7g4690 1000 MobiDBLite consensus disorder prediction 11 54 - -
Psa7g4690 1000 MobiDBLite consensus disorder prediction 561 575 - -
Psa7g4690 1000 Pfam Calcineurin-like phosphoesterase 697 904 IPR004843 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 697 724 IPR006186 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 732 759 IPR006186 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 765 789 IPR006186 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 803 829 IPR006186 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 833 860 IPR006186 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 893 913 IPR006186 GO:0016787
Psa7g4690 1000 PRINTS Serine/threonine phosphatase family signature 915 931 IPR006186 GO:0016787
Psa7g4690 1000 Pfam Kelch motif 329 374 IPR011498 GO:0005515
Psa7g4690 1000 MobiDBLite consensus disorder prediction 545 559 - -
Psa7g4690 1000 SMART pp2a_7 669 953 IPR006186 GO:0016787
Psa7g4690 1000 SUPERFAMILY Kelch motif 142 431 IPR015915 GO:0005515
Psa7g4690 1000 MobiDBLite consensus disorder prediction 1 59 - -
Psa7g4690 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1000 - -
Psa7g4690 1000 MobiDBLite consensus disorder prediction 542 577 - -
Psa7g4690 1000 CDD MPP_Bsu1_C 649 951 IPR041758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4690 Psa-Chr7 404979730 404995319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4690 661 896 Calmodulin-binding Proteins AT5G63870 29.412 1.30e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4690 7 404979730 404995319 Psa7g4690 7 404979730 404995319 ECH