Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4675 ATGTCAATGGATATGATGGCAACAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTAAATGTTCCATTCAGCAGTTTGTTAACCATAGTGACAGTAAGGTGTGGACATTGTGGTAATTTGCTATCAGTTAACATGATGGCAGCATCACTTCAACCATTTCCTCCTCCTACTCAACTCCCTCAGCCACAGAAACAGCACATAATCTATGAAGAACCAAACATCAAAGAAATGGGATCATCATCTTCAAAATGCAACAAAATAGCATCATTTGACACCGTAGTAGAGCATGAACAACCTAGGATTCCTCCCATTCGAC 334 0.4072 MSMDMMATERVCYVHCNFCNTILAVNVPFSSLLTIVTVRCGHCGNLLSVNMMAASLQPFPPPTQLPQPQKQHIIYEEPNIKEMGSSSSKCNKIASFDTVVEHEQPRIPPIR 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4675 111 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 1 111 - -
Psa7g4675 111 PANTHER PROTEIN YABBY 6-RELATED 1 111 IPR006780 GO:0007275
Psa7g4675 111 Pfam YABBY protein 7 96 IPR006780 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4675 1 111 C2C2-YABBY Transcription Factor Family AT1G08465 50.000 1.64e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Psa7g4675 YABBY 1.2e-28 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4675 K25796 - gmx:100500026 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4675 7 403964167 403966637 Psa7g4675 7 403964167 403966637 ECH
Psa5g6038 5 517809563 517816634 Psa7g4675 7 403964167 403966637 PCT