Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4672 ATGAAGTACATGAGGTTCCTTCGTAAACGAATGAATACGAAACCATCTCACGGTCTTATTCATTTCCGTGCTCCTTCAAAAATCTTCTGGAGAACTCTTAGAGGGATGATCCCACATAAGAAAAAGCGTGGGGAAGCTTCTCTTGCTCGTCTAAAGGTTTATGAAGGCATTCCTCCTCCATATGAAAAGATCAAGAGAATGGTTGTCCCAGATGCGCTTAAGGTATTAAGGCTTCATAAGGGACACACATATTGTCATCTTGGTCAAATTTCATCTAAAGTAGGGTGGAACTATTATGATACCATAAAGGAATTGGAAAACAAGAGAAAGGAAAGATCAACATTGGCTTATGAGAGAAAGAAGCACCTCCATAAATTAAGGGTGAAAGCTGAGAAAATTATGGAAGAGAAACTTGGCGCCCTTTCCCCCATGATTAAACCATAA 444 0.3964 MKYMRFLRKRMNTKPSHGLIHFRAPSKIFWRTLRGMIPHKKKRGEASLARLKVYEGIPPPYEKIKRMVVPDALKVLRLHKGHTYCHLGQISSKVGWNYYDTIKELENKRKERSTLAYERKKHLHKLRVKAEKIMEEKLGALSPMIKP* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4672 147 Gene3D Ribosomal protein L13 1 98 IPR036899 GO:0003735|GO:0005840|GO:0006412
Psa7g4672 147 TIGRFAM L13_A_E: ribosomal protein uL13 2 98 IPR005755 GO:0003735|GO:0006412|GO:0015934
Psa7g4672 147 ProSitePatterns Ribosomal protein L13 signature. 33 56 IPR023563 GO:0003735|GO:0005840|GO:0006412
Psa7g4672 147 SUPERFAMILY Ribosomal protein L13 1 98 IPR036899 GO:0003735|GO:0005840|GO:0006412
Psa7g4672 147 Pfam Ribosomal protein L13 8 59 IPR005822 GO:0003735|GO:0005840|GO:0006412
Psa7g4672 147 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 1 140 - -
Psa7g4672 147 Gene3D - 100 146 - -
Psa7g4672 147 PANTHER RIBOSOMAL PROTEIN L13 1 140 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4672 Psa-Chr7 403600188 403600646 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4672 1 147 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 78.231 1.53e-83 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4672 K02872 - gmx:100784830 252.292