Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4670 ATGATCCCACATAAGACAAAGCGTGGGGAAGCTGCTCTTGCTCGTCTAAAGGTTTATGAAGGTATTCCTCCTCCATATGACAAGATCAAGAGAATGGTTATCCCAAATGCACTTAAGGTATTGAGGCTTCAGAAGGGACACAAATATTGTCATCTTGGTCAACTTTCATCTGAAGTAGGGTGGAACTATTATGATACCATAAAGGAATTGGAAAATAAGAGAAAGGAAAGATCAGCATTAGCTTATGAGAGAAAGAAGCAGCTCAATAAATTATGGCTGAAAGCTAAGAAAATTGTGGAAGAGAAACTTGGCGCCCCTTCCCCCATGATTAAACCATAA 339 0.3953 MIPHKTKRGEAALARLKVYEGIPPPYDKIKRMVIPNALKVLRLQKGHKYCHLGQLSSEVGWNYYDTIKELENKRKERSALAYERKKQLNKLWLKAKKIVEEKLGAPSPMIKP* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4670 112 Gene3D Ribosomal protein L13 1 63 IPR036899 GO:0003735|GO:0005840|GO:0006412
Psa7g4670 112 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 1 105 - -
Psa7g4670 112 PANTHER RIBOSOMAL PROTEIN L13 1 105 IPR005822 GO:0003735|GO:0005840|GO:0006412
Psa7g4670 112 Gene3D - 65 111 - -
Psa7g4670 112 SUPERFAMILY Ribosomal protein L13 1 63 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4670 Psa-Chr7 403488577 403489009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4670 1 112 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 78.571 2.44e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4670 K02872 - gmx:100784830 191.43