Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4669 ATGGGTGTCCCGGGGAAGTGGATTAGAGCATTGGTTGGTTTAAAGAAATCAGAAAAGCGCGAGTCCTTAGAGAAGGATGGAAATGCTAGCAAGTTTCGCCATCGAAGAAAGCATTCCATCGAAATTAACAGTAGCAAACTTCAAAATGAGTTTGGTGATGATGGCGCTACACCTATTGGAGATGCAGGTCTTGCAAATCCCCAATCAAACCTTGATGCTCATTATTCTCCTTCTACTTCACAACAAGCACCGGATGTTGCACATAGTCATCAAATCACAAATGAAGAATGGGCTGCAATATGCATTCAAACAGCGTTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTAGGGCAAGGCGTGTTCGCTTGGCATTGGAAAGTCAAACAGATCAACAGAAACTTCAGCAACAGCTTGTAAACGAAGCCCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAAACCAAAATATTAAAGAGACAGGAGGCTGCAGCAAAACGCGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGGCAGCTTGCCGCTTCTTCAGGGTTTGAACCCGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCTTGGGAGAATCGCTTTCTTGACATTAATACGAAAGATGGAGTGAAGGTAGACGAAAATGATGTTATGGATGGTAGTAGCAATGGAATCAGACCTCAGTTAAAGCCTAATAATGCGAAATCAAATCTGCCAAACATCCATCCAAGTGTTGTCAGTCACAAAACTGGCCCCTCTCTCTCTGATGGCTGTGATTCTTCTTCCACTAGTAAGTCAGCAGGTTTGCTCGAGACATCAAACACACAATCTGTTAAACCAAAATCTAATGCAAATGTTCAAATTCCCGTTGAAGAAAACAACACAAAATCTGGCTTTCCAAGATCTCAAAGTAATCCAAAGGAGAGAAACTCACAGGTAGATAAACAGACGAAAAAGCGGTTATCTCTTCCTAACAATGCAGGGGTTGTTTCCGGGGCTCAAACGAACAAATATCCTACCAGAACTAATGTGAAAGGGACACGCAGCACACAAAAGCCTATAAGGAATAAACCTAAGCTCAATGAAGACGGGAATAGGAATCTTACTAAATCCGTTCCACAGCAAACGGGTGTGTAA 1323 0.4376 MGVPGKWIRALVGLKKSEKRESLEKDGNASKFRHRRKHSIEINSSKLQNEFGDDGATPIGDAGLANPQSNLDAHYSPSTSQQAPDVAHSHQITNEEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQTDQQKLQQQLVNEARVREIEEGWCDSVGSVEEIQTKILKRQEAAAKRERAMAYALAHQWQAGSRQLAASSGFEPDKSSWGWNWLERWMAVRPWENRFLDINTKDGVKVDENDVMDGSSNGIRPQLKPNNAKSNLPNIHPSVVSHKTGPSLSDGCDSSSTSKSAGLLETSNTQSVKPKSNANVQIPVEENNTKSGFPRSQSNPKERNSQVDKQTKKRLSLPNNAGVVSGAQTNKYPTRTNVKGTRSTQKPIRNKPKLNEDGNRNLTKSVPQQTGV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4669 440 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Psa7g4669 440 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Psa7g4669 440 Gene3D - 95 137 - -
Psa7g4669 440 PANTHER IQ-DOMAIN 5-RELATED 2 396 - -
Psa7g4669 440 MobiDBLite consensus disorder prediction 275 440 - -
Psa7g4669 440 MobiDBLite consensus disorder prediction 18 47 - -
Psa7g4669 440 MobiDBLite consensus disorder prediction 283 372 - -
Psa7g4669 440 MobiDBLite consensus disorder prediction 379 416 - -
Psa7g4669 440 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Psa7g4669 440 PANTHER IQ-DOMAIN 5-RELATED 2 396 - -
Psa7g4669 440 SMART iq_5 117 138 IPR000048 GO:0005515
Psa7g4669 440 SMART iq_5 94 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4669 Psa-Chr7 403463855 403468219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4669 1 424 IQD Protein Family AT3G22190 56.481 2.16e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4669 - - gmx:100787148 507.294