Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4658 ATGAAGTGGAATAGAGGACACATTATAGGCCATGGCTCAACTGCCACCGTCTCTCTCGCCACCGTTAATGGAGAAGTCTTCGCTGTGAAGTCATCGGAGGTATCGTGTTCCGAGCCGCTAAAGAGAGAGGAGAGAATTCTATCTTCTCTATGTTATGCCAATCCTTATGTTGTTACTTACAAAGGGTGTGACATTTCTACGGAGAACAACAGCAACAAGCTCATGTACAATATTTTCATGGAGTACATGCCATTCGGCACGGTTAGTCAGCACGGTGGTCTGCTCGACGAGCAAACCATCGTGTGCTATACAAGGCAAGTTGTTAATGGGTTAGAGCATTTGCATTCAAAAGGGTTAGTGCATTGTGACATCAAGGGTGCTAATATCTTGATTGGAGAACAAGGAGCCAAAATCGGAGACTTTGGATGTGCTAAAAGCGTAAACGAAGCGGCCGCACCAATCCGCGGTACGCCTGTTTTTATGGCACCAGAGGTGGCGCGCGGCGAAGAACAAGGTTATGCTAGTGATATTTGGTCACTTGGTTGCACTATAATCGAAATGTTCACCGGTTCTTCACCTTGGCCTAATGCAGATGACCCTATTTCAGCACTTTTTCATATAGCATACTCCAATGAAGTTCCAAGGATTCCATTTTCATTATCTGATCAAGCAAAGGACTTTTTAGAGAAATGCTTAAGGAAAAATCCAAAAGAGAGGTTCACAGCTAGTCAACTTTTGAAGCATCCATTTCTTGAAGAATTAAGTTCTAGTTCTAAGCAAGTTGTGGAATCTAATTCATATTCACCAACAAGTATTCTTGAACAAGGCTTTTGGAGTTCAATGGAAGAATCAGAGAGCCTTAAGTTTAGTAATTTGATTCACACCAAAAGTGTTGACACTTTGGTGGATGATAGAATCAAAAGGTTAACAGGTGAGCCATGTTTGGCATGGTGGCATGATGATCATGATGATGTTGATGAAAATTGGATCACAATTAGAGAGAATGAAGTTGATAGTTTTTGCAATTGTTGGTCAGAATTAGGTTCAACAAGTGATGATGAGTTGGCTTTGAAAGGGTTGGTAGAGAGTAATGTGAAAGATAGAATTAGTGGGCATGTTTGTAGGGAAGGTAATTTTGTAGGTAGTAATTTTAATTTTCATGTAGGTATTGTAAAGATGCTATTTCCATCAACATTAGATGGTTTATAA 1209 0.4045 MKWNRGHIIGHGSTATVSLATVNGEVFAVKSSEVSCSEPLKREERILSSLCYANPYVVTYKGCDISTENNSNKLMYNIFMEYMPFGTVSQHGGLLDEQTIVCYTRQVVNGLEHLHSKGLVHCDIKGANILIGEQGAKIGDFGCAKSVNEAAAPIRGTPVFMAPEVARGEEQGYASDIWSLGCTIIEMFTGSSPWPNADDPISALFHIAYSNEVPRIPFSLSDQAKDFLEKCLRKNPKERFTASQLLKHPFLEELSSSSKQVVESNSYSPTSILEQGFWSSMEESESLKFSNLIHTKSVDTLVDDRIKRLTGEPCLAWWHDDHDDVDENWITIRENEVDSFCNCWSELGSTSDDELALKGLVESNVKDRISGHVCREGNFVGSNFNFHVGIVKMLFPSTLDGL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4658 402 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Psa7g4658 402 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4658 402 PANTHER MAP KINASE KINASE KINASE 1 351 - -
Psa7g4658 402 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4658 402 CDD STKc_MAPKKK 2 251 - -
Psa7g4658 402 Gene3D Transferase(Phosphotransferase) domain 1 2 312 - -
Psa7g4658 402 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 351 - -
Psa7g4658 402 Pfam Protein kinase domain 5 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4658 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Psa7g4658 402 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4658 Psa-Chr7 401616366 401618331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4658 1 335 MAP Kinase Kinase Kinase AT1G05100 50.284 5.45e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa7g4658 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4658 K20716 - gmx:100794648 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4658 7 401616366 401618331 Psa7g4658 7 401616366 401618331 ECH
Psa1g4093 1 330271214 330272403 Psa7g4658 7 401616366 401618331 ECH
Psa5g6018 5 516734900 516736347 Psa7g4658 7 401616366 401618331 ECH