Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4657 ATGGGTGTGATTAAATCAGCTATAGCAGATGCAATTTTAACATCAATATTTGTTTTCTTCATCTCAACATTAAGAATCATCTCTACAAAAACATCTTTATTTCTGAATCTTCAACCAGTTTCGCTTCCAGCCCTATTCATCACAACTATCCTAAACACAATAATCATCCTCACAGTAACCCTAATAGGAAGAATCTTAGGTGGTGCAAGCTTCAACCCTTCATCCACAGTTTCCTTCTACACATTAGGACTCAGACCCGATTCATCTCTCCTATCAATGGCCATAAGATTTCCAGCTCAAGCAATAGGCGGAGCTATGGGCATCAAATCCATCCTTTACGTCATGCCAAGTGAATACCTACACATGATGAAAGGTCCTTCTTTGAAGGTGGATTTGCATACAGGAGCTATAGCTGAAGGGGTTTTGAGTTTTACTCATAACTTTGTTATTTTAATTCTTGTGCTTAAGGGTCCTAAGAATCCTTGGTTGAAGGTTTATTTGCTCTCTGTGACTACTTTGGTTTTGGTTATTTTGGGTTCTGGTTATACAGGACCTTCTTTGAACCCTGCTAATGCTTTTGGTTGGGCTTATATCAACAATAAGCATAATAGTTGGGAGCAGTTTTATGTTTTTTGGATATGTCCTTTGATTGGAGCTTCTCTTGCTGCTTTGGTTTATCGCTTTGTGTTTATGTCACCAGTTAAGGAGAAGAAAGCTTGA 720 0.3833 MGVIKSAIADAILTSIFVFFISTLRIISTKTSLFLNLQPVSLPALFITTILNTIIILTVTLIGRILGGASFNPSSTVSFYTLGLRPDSSLLSMAIRFPAQAIGGAMGIKSILYVMPSEYLHMMKGPSLKVDLHTGAIAEGVLSFTHNFVILILVLKGPKNPWLKVYLLSVTTLVLVILGSGYTGPSLNPANAFGWAYINNKHNSWEQFYVFWICPLIGASLAALVYRFVFMSPVKEKKA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4657 239 PANTHER AQUAPORIN SIP1-1 1 239 IPR044222 GO:0015250
Psa7g4657 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Psa7g4657 239 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4657 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4657 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4657 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4657 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4657 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4657 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
Psa7g4657 239 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4657 Psa-Chr7 401302247 401304315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4657 1 230 Major Intrinsic Protein MIP AT3G04090 45.106 9.84e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4657 K09875 - gmx:100797126 325.094