Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4633 ATGGAGAAGTACCTGAGAGAAAACTTCCACGTGCAACCTAAACGACCTTCGGAAGACGCTCAACTGCGATGGAGATCCGCCGTATCCGTCGTCAAGAACCCCCGCCGTCGCTTCCGATGGGTTGCCAATCTCGCCCAACGTGCCGACGCCGAACAAAAACGCAAGAAACTCCAGGAAAAGATACGAGTGGCTCTCTATGTGCAAAAAGCAGCATTACATTTTATAACCGCTGGAAACCGAAGAGCTGGTAATTACATGCTCTCCAAAGAGATTCAAGATGCAGGTTTTGGAATCAACCCAGATGATGTAGCATCCATTGTCAGATCCCATGACACTAAATGTTTAGAACATCATGAAGGAGTTGAAGGATTAGCAAAAGCTGTCCGCGTTTCCTTTCAAGAAGGCGTGAGTTCCAGCGATGTAAAACATAGACAACATATCTACGGTCATAACCGCCATACCGAGAAACCCTCAAGGAGTTTCTGGATGTTTGTTTGGGATGCAATGCAAGACTTAACACTGATTATCCTTATTCTATGTTCTGTTGTTTCAATCGGTGTTGGAATCTTAACCGAAGGTTTTCCTAAAGGTATGTATGATGGACTTGGAATCATACTATGTATTATTTTAGTTGTTTTTGTCACTTCAATAAGTGACTATAAACAGTCTTTGCAATTTAAGGATTTGGATAAAGAGAAAAAAAATGTAAGCATTCATGTTACAAGAGATAGTAGAAGACAGAAGGTTTCTATTCATGAACTAGTGGTTGGAGATATAGTTCATCTCGCAATCGGAGACATAGTTCCTGCAGATGGATTATTTATATCTGGTTTTAGTCTATTGGTCGATGAATCAAGTTTATCCGGTGAGAGTGAAGCAGTGAACATGGACAAACAGAAGCCTTTTCTGTTATGTGGGACCACAGTTCAAGATGGTTCTGCTAAGATGCTAGTGACTGCGGTCGGTATGAAGACAGAATGGGGAAGATTGATGGAAACCTTGAATGAAGGTGGTGATGATGAAACACCTCTTCAGGTTAAACTAAATGGTGTTGCTACACTTATTGGAAAGATAGGATTAGGTTTTGCATTGGTAACGTTCTTAGTTCTAACTGGTAGGTTCTTATTGGTGAAAATATCGCATGATAGTATCGCTAAATGGTCTCTAGATGATGCGTCTAAGCTTCTCAACTTCTTTGCTACTGCTGTTATTATAATAGTTGTGGCAGTTCCTGAAGGGTTACCTTTAGCAGTTACACTAAGCCTTGCATTTGCAATGAAGAAACTAATGAACGATAAGGCACTAGTTAGGCACTTATCTGCATGTGAAACAATGGGTTCTGCTGGTTGTATTTGCACCGATAAAACTGGAACTTTGACTACAAATCAAATGGTTGTTGACAAAATATGGATTTGTGAACTAACTAAAGCAATTAAAACCGGAAATTTCGATGAAAGTGTGTTGAAGAAATCAATTTCCGTGGAGATATTTGATCTACTTTTGCAGTCCATATTTCAGAATACTGCCTCCGAGGTTGTTAAAGGTGAAGATGGAAAGAACAAGGTGATGGGAACTCCAACAGAATCAGCATTGCTTGGATTTGGTTTGATTTTAGGAGGTGATACTAAGTTTTACAATGACAAGTATAAGATAATGAAAGTTGAGCCTTTCAATTCAAACAGAAAAAAGATGTCGGTTCTTGTTTCCCTTCCAGATAGCACCAACAAAACTAGAGCATTTTGTAAAGGAGCATCAGAGATAGTGGTTAAAATGTGTGACAAAGTTGTTAATGCAGAAGGAAAAGTTGTTGATTTGAATGAACAACTAAGAAACAACATCAATGAAGTTATTAATGGTTTTGCTTGCGATGCACTGAGAACACTGTGCATAGCTTTTAAGGATATTGAAGGAAGCTCTGAAAGTGATAGCAGTATTCCTGAGGATAAATATACTCTAATTTCAATTATTGGAATCAAGGATCCAGTGAGACCTGGAGTAAAAGAAGCTGTTAAGACTTGTTTGGCAGCTGGAATCACTGTAAGAATGGTAACTGGTGATAATATAAACACTGCTAAAGCTATAGCTAGAGAATGTGGTATTTTGACTGATGGTTTAGCCATAGAGGGACCAGATTTCAGAAACAAGACTCAGCAAGAAATGGAAGAGATAATACCTAAATTGCAGGTAATGGCTCGATCTTTGCCTCTTGATAAGCACACCTTAGTGACTCATTTGAGGAAGGACTTTCATCAAGTTGTGGCAGTAACAGGTGATGGGACCAATGATGCTCCAGCTTTGCATGAAGCTGATATTGGATTTGCTATGGGTATTGCTGGAACCGAGGTTGCAAAAGAAAATGCGGATGTGATTGTGATGGACGATAACTTCACCACAATAGTGAATGTAACAAGATGGGGTCGTTCGGTTTATATTAACATACAAAAGTTTGTCCAGTTTCAGTTAACAGTTAATGTTGTAGCTCTCATGCTGAATTTTGTTTCAGCTTGTGTATCAGGCTCTGCTCCTCTTACTGCTGTTCAAATGCTATGGGTAAACATGATAATGGACACACTAGGTGCATTGGCATTGGCTACAGAACCTCCCCATGATGGATTGATGAAGAGACCACCTATTGGAAGAAATGCCAAGTTCATCACTGGGGTCATGTGGAGGAACATCATTGGTCAGAGTCTTTATCAATCTATCGTCCTTTTAGTTCTTAAATTTCGTGGGGAACACATTCTCAACCTCAACGGACCTGATGCTACCGTCACTCTAAATACATTCATATTCAACACCTTTGTGTTTTGCCAGGTATTCAACGAGGTGAACAGCCGCGACATGGAAAAGATAAATGTTTTCGAAGGACTATTCAGTAGTTGGATATTTCTGATAGTAATGGCCGCAACAATATGCTTTCAAATCATAATAGTTGAATTTCTTGGTGCTTTTGCTCAAACAGTGCCACTCAGTAGTGATTTGTGGCTCATAAGTGTGATGGTTGGTGCAGTAAGTTTACCAGTAGCTGTTGTCCTAAAGTGCATTCCAGTTCCTGTCAAAAATTACGTCGCAACGCATCACGATGGCTACGAGCAGCTTCCAAGTGGACCAGAGTTGGCATGA 3123 0.3996 MEKYLRENFHVQPKRPSEDAQLRWRSAVSVVKNPRRRFRWVANLAQRADAEQKRKKLQEKIRVALYVQKAALHFITAGNRRAGNYMLSKEIQDAGFGINPDDVASIVRSHDTKCLEHHEGVEGLAKAVRVSFQEGVSSSDVKHRQHIYGHNRHTEKPSRSFWMFVWDAMQDLTLIILILCSVVSIGVGILTEGFPKGMYDGLGIILCIILVVFVTSISDYKQSLQFKDLDKEKKNVSIHVTRDSRRQKVSIHELVVGDIVHLAIGDIVPADGLFISGFSLLVDESSLSGESEAVNMDKQKPFLLCGTTVQDGSAKMLVTAVGMKTEWGRLMETLNEGGDDETPLQVKLNGVATLIGKIGLGFALVTFLVLTGRFLLVKISHDSIAKWSLDDASKLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNQMVVDKIWICELTKAIKTGNFDESVLKKSISVEIFDLLLQSIFQNTASEVVKGEDGKNKVMGTPTESALLGFGLILGGDTKFYNDKYKIMKVEPFNSNRKKMSVLVSLPDSTNKTRAFCKGASEIVVKMCDKVVNAEGKVVDLNEQLRNNINEVINGFACDALRTLCIAFKDIEGSSESDSSIPEDKYTLISIIGIKDPVRPGVKEAVKTCLAAGITVRMVTGDNINTAKAIARECGILTDGLAIEGPDFRNKTQQEMEEIIPKLQVMARSLPLDKHTLVTHLRKDFHQVVAVTGDGTNDAPALHEADIGFAMGIAGTEVAKENADVIVMDDNFTTIVNVTRWGRSVYINIQKFVQFQLTVNVVALMLNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNAKFITGVMWRNIIGQSLYQSIVLLVLKFRGEHILNLNGPDATVTLNTFIFNTFVFCQVFNEVNSRDMEKINVFEGLFSSWIFLIVMAATICFQIIIVEFLGAFAQTVPLSSDLWLISVMVGAVSLPVAVVLKCIPVPVKNYVATHHDGYEQLPSGPELA* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4633 1040 Pfam Cation transporting ATPase, C-terminus 841 1014 IPR006068 -
Psa7g4633 1040 Pfam haloacid dehalogenase-like hydrolase 450 770 - -
Psa7g4633 1040 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Psa7g4633 1040 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Psa7g4633 1040 PRINTS P-type cation-transporting ATPase superfamily signature 654 665 - -
Psa7g4633 1040 PRINTS P-type cation-transporting ATPase superfamily signature 676 686 - -
Psa7g4633 1040 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Psa7g4633 1040 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Psa7g4633 1040 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1024 - -
Psa7g4633 1040 Gene3D - 449 801 IPR023214 -
Psa7g4633 1040 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Psa7g4633 1040 CDD P-type_ATPase_Ca_PMCA-like 141 889 - -
Psa7g4633 1040 Pfam Cation transporter/ATPase, N-terminus 116 184 IPR004014 -
Psa7g4633 1040 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Psa7g4633 1040 Gene3D - 462 661 IPR023299 GO:0000166
Psa7g4633 1040 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g4633 1040 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g4633 1040 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g4633 1040 Gene3D - 135 335 - -
Psa7g4633 1040 SUPERFAMILY HAD-like 451 861 IPR036412 -
Psa7g4633 1040 SFLD p-type atpase 434 808 IPR044492 -
Psa7g4633 1040 Pfam E1-E2 ATPase 237 430 - -
Psa7g4633 1040 SUPERFAMILY Calcium ATPase, transduction domain A 237 333 IPR008250 -
Psa7g4633 1040 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1017 IPR023298 -
Psa7g4633 1040 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 658 IPR023299 GO:0000166
Psa7g4633 1040 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 108 1017 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Psa7g4633 1040 Gene3D - 16 76 - -
Psa7g4633 1040 Gene3D - 167 1014 - -
Psa7g4633 1040 SMART Cation_ATPase_N_a_2 115 189 IPR004014 -
Psa7g4633 1040 PANTHER CATION TRANSPORTING ATPASE 3 1024 - -
Psa7g4633 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 204 516 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g4633 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 550 702 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g4633 1040 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 844 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g4633 1040 SFLD C1.7: P-type atpase like 434 808 - -
Psa7g4633 1040 Coils Coil 595 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4633 Psa-Chr7 397097994 397116947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4633 57 1037 Primary Pumps ATPases AT3G57330 68.228 0.0 1375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4633 K01537 - gmx:100805063 1719.9