Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4591 ATGTTTGGGAGAGCACCGAAGAAAAGTGATAGTACGAGGTACTATGAAATCCTTGGTGTTTCTAAGAACGCGTCTCAGGATGATTTGAAGAAAGCTTACAAGAAAGCTGCTATTAAGAATCATCCCGATAAAGGTGGTGATCCCGAGAAGTTCAAAGAGCTAGCACAAGCTTATGATGTTCTGAGTGATCCTGAGAAGCGTGAGATATATGATACATATGGTGAGGATGCTCTTAAGGAAGGAATGGGTGGTGGTGGTGGCGGTGGCCATGACCCATTTGACATCTTCTCGTCTTTCTTTGGTGGTGGTGCCGGTGGTAGTAGCCGTGGACGGAGGCAGAGACGTGGAGAAGATGTTGTTCACCCTCTCAAGGTCTCTCTGGAGGATCTTTATCTCGGAACATCTAAGAAGCTTTCTCTCTCGAGGAATGTCTTGTGCTCAAAGTGCAGTGGCAAAGGTTCTAAATCTGGAGCTTCCATGAAATGTGCTGGTTGTCAAGGAACTGGTATGAAGGTTTCTATTAGGCATCTCGGTCCATCAATGATTCAGCAAATGCAGCATCCCTGCAATGAATGTAAGGGTACTGGTGAGACTATCAATGACAAGGATCGCTGCCCACAGTGTAAGGGAGAGAAGGTTGTACAAGAAAAGAAAGTACTTGAAGTTCACGTGGAGAAGGGAATGCAGAACAGCCAGAAGATTACATTCCCTGGCGAAGCTGATGAAGCACCAGACACAGTTACTGGGGATATCGTATTTGTGCTTCAACAGAAAGAACATCCTAAGTTCAAAAGAAAGAGTGAAGACCTTTTCGTGGAGCACACATTGTCCCTCACTGAGGCTTTATGTGGTTTCCAATTTGTGCTTACTCACTTGGATGGTCGCCAACTCCTTATCAAATCAAACCCTGGAGAAGTTGTCAAGCCTGATTCATTCAAGGCTATTAACGATGAGGGAATGCCGATGTACCAGAGGCCCTTTATGAAGGGCAAGCTTTACATTCACTTTACCGTGGAATTCCCTGAGACGCTAAGTCCTGATCAGGTGAAGGGTTTGGAGGCTGTTCTTCCGGCTAGACCTTCATCACAGTTGACAGACATGGAGCTTGATGAATGCGAGGAAACTACACTTCATGATGTCAATATGGAAGAGGAGACAAGGAGGAAACAACAGCAGCAACATGAGGCATATGATGAAGATGATGATATGCCTGGCGGGGCACAGAGGGTACAGTGCGCCCAGCAGTAG 1248 0.4615 MFGRAPKKSDSTRYYEILGVSKNASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDTYGEDALKEGMGGGGGGGHDPFDIFSSFFGGGAGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCSGKGSKSGASMKCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVHVEKGMQNSQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAINDEGMPMYQRPFMKGKLYIHFTVEFPETLSPDQVKGLEAVLPARPSSQLTDMELDECEETTLHDVNMEEETRRKQQQQHEAYDEDDDMPGGAQRVQCAQQ* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4591 415 Pfam DnaJ domain 14 71 IPR001623 -
Psa7g4591 415 Pfam DnaJ C terminal domain 120 341 IPR002939 -
Psa7g4591 415 Gene3D DnaJ domain 10 109 IPR036869 -
Psa7g4591 415 SUPERFAMILY Chaperone J-domain 8 107 IPR036869 -
Psa7g4591 415 Pfam DnaJ central domain 146 212 IPR001305 GO:0031072|GO:0051082
Psa7g4591 415 CDD DnaJ 14 63 IPR001623 -
Psa7g4591 415 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 7 415 - -
Psa7g4591 415 PRINTS DnaJ domain signature 15 33 IPR001623 -
Psa7g4591 415 PRINTS DnaJ domain signature 46 66 IPR001623 -
Psa7g4591 415 PRINTS DnaJ domain signature 66 85 IPR001623 -
Psa7g4591 415 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 143 215 IPR036410 -
Psa7g4591 415 CDD DnaJ_C 117 344 - -
Psa7g4591 415 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 415 IPR044713 GO:0006457|GO:0030544
Psa7g4591 415 Hamap Chaperone protein DnaJ [dnaJ]. 10 367 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Psa7g4591 415 Gene3D - 260 342 - -
Psa7g4591 415 Gene3D - 146 212 - -
Psa7g4591 415 Gene3D - 110 258 - -
Psa7g4591 415 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Psa7g4591 415 SUPERFAMILY HSP40/DnaJ peptide-binding domain 112 270 IPR008971 GO:0006457|GO:0051082
Psa7g4591 415 SUPERFAMILY HSP40/DnaJ peptide-binding domain 263 350 IPR008971 GO:0006457|GO:0051082
Psa7g4591 415 MobiDBLite consensus disorder prediction 376 415 - -
Psa7g4591 415 ProSiteProfiles Zinc finger CR-type profile. 133 217 IPR001305 GO:0031072|GO:0051082
Psa7g4591 415 MobiDBLite consensus disorder prediction 376 405 - -
Psa7g4591 415 CDD DnaJ_zf 146 212 IPR001305 GO:0031072|GO:0051082
Psa7g4591 415 SMART dnaj_3 12 66 IPR001623 -
Psa7g4591 415 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4591 Psa-Chr7 390266594 390269698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4591 14 73 C2H2 Transcription Factor Family AT1G74250 42.029 1.71e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4591 K09503 - gmx:547558 717.998