Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4558 ATGGGAAGCCAGAGTTACTTTATGGTTTTAATTATATGTGTTGTAGCAATAATTGGATCAAGTGATGCTGAATTGAAGTTAGGTTACTATGGTAAAAGCTGCCCAAAAGCTGAAGAAATAGTTTTGAAAGACTCAGTTCATGCCATTGGTGGACCTTATTGGAATGTTCCAACGGGTCGAAGGGACGGAACCATCTCTAAAGCAGCAGATGTTTTTATCACCCTTCCTGCTCCTTTTAACAACCTCACCACTCTTCTAACACTCTTTGGAAATGTTGGACTTGATGCGAATGACTTGGTTTTGCTTTCTGGTGCTCATACAATCGGTGTTTCTCATTGTCCATCGATTTCAAACCGACTATATAATTTTACCGGAAAAGGTGACCAAGACCCGGATCTAGATAGTGAATATGCTACAAATTTGAAAAAATTTAAGTGCAAGAATATCAATGATCAAACCACACTTATCGAAATGGACCCTGGAAGTCGCAATACATTTGATCTTGGTTATTTCAAACAAGTAGTTAAGAGAAGGGGTTTGTTTGAATCAGATGCTGCTTTGCTTAAAAGTTCTACAACAAGATCAATTGTTGCACAACATCTTCAATCAAATGAAAAATTCTTTACTGAATTTGCCAAGTCTATGGAGAAAATGGGCAGAATTAATGTTAAGATTGGGACTGAAGGACAAATTAGGAAACATTGTGCATTTATTAATTAA 720 0.3667 MGSQSYFMVLIICVVAIIGSSDAELKLGYYGKSCPKAEEIVLKDSVHAIGGPYWNVPTGRRDGTISKAADVFITLPAPFNNLTTLLTLFGNVGLDANDLVLLSGAHTIGVSHCPSISNRLYNFTGKGDQDPDLDSEYATNLKKFKCKNINDQTTLIEMDPGSRNTFDLGYFKQVVKRRGLFESDAALLKSSTTRSIVAQHLQSNEKFFTEFAKSMEKMGRINVKIGTEGQIRKHCAFIN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4558 239 PANTHER PEROXIDASE 43 238 - -
Psa7g4558 239 PANTHER PEROXIDASE 3 43 - -
Psa7g4558 239 Gene3D - 43 239 - -
Psa7g4558 239 ProSiteProfiles Plant heme peroxidase family profile. 33 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 ProSitePatterns Peroxidases proximal heme-ligand signature. 98 108 IPR019793 -
Psa7g4558 239 Pfam Peroxidase 43 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 SUPERFAMILY Heme-dependent peroxidases 44 239 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Haem peroxidase superfamily signature 50 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Haem peroxidase superfamily signature 98 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Haem peroxidase superfamily signature 159 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Plant peroxidase signature 50 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Plant peroxidase signature 97 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Plant peroxidase signature 173 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PRINTS Plant peroxidase signature 213 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PANTHER PEROXIDASE 25-RELATED 43 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 PANTHER PEROXIDASE 25-RELATED 3 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4558 239 Gene3D Peroxidase, domain 2 76 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4558 Psa-Chr7 380922556 380924196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4558 33 239 Peroxidase AT4G11290 62.981 3.76e-92 272