Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4547 ATGTCAAGATCCAAAGAGGTTATTACTTGCAAAGCTGCAATATGCTGGGGTGTAGGAAAGGCAGCGACGGTGGAAGAGATACAAGTGGAACCACCAAAAGCAACAGAAGTTCGAGTTAAGATGTTGTGTTCTAGTGTCTGCCATACAGACATTTCAAGCCTTCAAGGATTCCCACATAATCAATTTCCTCTAGCACTTGGACACGAAGGAATTGGTGTTGTAGAGAGTGTTGGTGATGAAATAACAAATCTAAAGGAAGGTGATTTGATAATTCCAACATACATAGGGGAGTGTGAAGAATGTGAGAACTGTGTTTCAGGGAAAACTAATTTGTGTTTGACACATCCTGTAAGATTGAATGGTCTAATGCCGGATAACACTTCAAGGTTGTCGGTACGAGGTCAAACACTGTATCATGTTTTGAGTTGTGCTACATGGTCGGAGTATGTGGTTGTTGATGTCAACTACCTTCTCAAAGTTGATCCAACCACTAATTTAGCTCATGCTAGTTTCATTTCATGTGGTTTTTCAACCGGGTATGGAGCTTGTTGGAAGGAAGCAGCTGTTGAAACCGGTTCAACCGTAGCTGTTTTTGGTCTCGGGGCTGTTGGATTAGGGGCCATAAGTGCGGCCAAGATGATGGGAGCAAGTAAGATAATTGGAGTTGACAGAAATGAGATGAAGAAAGAAAAAGGAGAAGCTTTTGGAATGACACACTTTATAAATACTAATGTTTCTGATAAATCTGCTTCTGATTTGGTTAAAGAGTTAACTGGAATGGGTGTAGATTACTGTATTGAATGTACTGGTGTTGCATCTATGTTTACCGAATCTGTGGAAGCCACAAAAATGGGAACAGGTAAAACAATTGCAGTTGGGATAGCAGCTGAACTTGTTGTGCCATTTGGACTTCTTGCCATCGTGTTTGGTAGAACCTTAAAAGGTTCTGTTTTTGGAGGTATAAAAGCTAAATCCGATCTTTCCATCATTGCTCACAAATGTCAAAAACAGGAATTCCCTCTTGAAGAACTTTTCACTCATGAGGTTCCTTTGGTTGATATAAACAAAGCATTTGAGTTACTGAAACAGCTCGATTGTGTGAAAGTTGTTATCAAGATGTAA 1122 0.4002 MSRSKEVITCKAAICWGVGKAATVEEIQVEPPKATEVRVKMLCSSVCHTDISSLQGFPHNQFPLALGHEGIGVVESVGDEITNLKEGDLIIPTYIGECEECENCVSGKTNLCLTHPVRLNGLMPDNTSRLSVRGQTLYHVLSCATWSEYVVVDVNYLLKVDPTTNLAHASFISCGFSTGYGACWKEAAVETGSTVAVFGLGAVGLGAISAAKMMGASKIIGVDRNEMKKEKGEAFGMTHFINTNVSDKSASDLVKELTGMGVDYCIECTGVASMFTESVEATKMGTGKTIAVGIAAELVVPFGLLAIVFGRTLKGSVFGGIKAKSDLSIIAHKCQKQEFPLEELFTHEVPLVDINKAFELLKQLDCVKVVIKM* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4547 373 SUPERFAMILY GroES-like 5 189 IPR011032 -
Psa7g4547 373 CDD liver_alcohol_DH_like 8 372 - -
Psa7g4547 373 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Psa7g4547 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Psa7g4547 373 Gene3D - 179 316 - -
Psa7g4547 373 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 372 - -
Psa7g4547 373 Pfam Zinc-binding dehydrogenase 202 320 IPR013149 -
Psa7g4547 373 Gene3D - 13 368 - -
Psa7g4547 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 322 IPR036291 -
Psa7g4547 373 PANTHER ALCOHOL DEHYDROGENASE 5 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4547 Psa-Chr7 378782037 378783812 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4547 35 365 Monolignol Biosynthesis Gene Families AT2G21730 25.882 4.21e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4547 K00121 - gmx:100798341 596.66