Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4542 ATGGAATTGACAAGAACCGGTTGTGCGGTTATTTATGTCATTCTCCTTTGTGCTTTGGCTCATGGGAGTTCAGAGGGGAAAGAAGATGACCTATATACAGATGCTCCTGTTTCCTCACCTTTCCTCAATATTCATGGAAAACAGGCGAAGAATGTGTGGAAACATTGCAGGAAAGAATTGACAGAGAAGAACAATGATGTTAAAGGCATCAACTTGCATCCATTGGAAGGAAGCAGTGACATCCATAAGAAAAAAAAAGTTTTGGATTGCATAAGAACAAGTGCTACTCCTCCAGCACCTATTTCTAAATCAAGAGCGTCTAGTGCTAATAGTCCATCCCCCGAGCATTCATTGGTAGCGCCAATTCGTCTTTCAACACCAACAATTTCTTCAACACCGTCACCTACTCCTGTTCCTGTTCCTAATCCTAGTACTACTCCTGTTCCTGTTCCTAGTACTACTCCTGTTCCTGTTCCTAGTACTGGAATCCCGTATTTACCACTCCCTCCAGATAATTTGGCACCGTTACCACCGTCTCCGAGACAATATGCTCCTCCATCTCATATAGCAAGTGTTCCGATAACTTCGCCGCCTTCATTTAAACATGATGAGGAAAAGAAAAAAGCAATTATTTTAGCTGCATCTGTATCAGGAATCGTAGTCTTGATAGGATTGTCGCTGTGCTATCGCGAGGCCAAAACCGGTAAAGTGGAGAGAGAGGACAACCATTTGCTCATATTAACCTCAAATGATTATTCTGGAGGTCCCCAGATGATTGTTCGTTTAGGAGATACTAATACAGAAGAAACTGGTGTTATTATTAACAAAGGAAAGAGTTCATCTAGTGGAAGAAAGTGGTCCATGAAGGGCCGAGATGATAACAATATCACACTGGCTGAAACATCAACGTCAGAAGATGTGGGACAAGTAACATCAACTTCTTCTAGAATACCAGCCCCTCCGCCTCCTGGCCCACCGCCACCTCCTCCTCCACAGCCACCCGTGCTTGCTCCTCGTCCTCCACCGCCTCCAAAATCCAGCCATCCACCACCTGCTCCTCCCCCCAAACCAATGGCTGGTAAAAACATAGGTATACCTCTTGGACCGCTAAAACAAGGAAGTTCTACTGAAGGTGATGCTCCAAAGCCTAAACTAAAGCCGTTCTTTTGGGACAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCATTTGTGTTCAATGAAGAAATGATGGAGTCTTTATTTGGTTGCGCCAACCAGAATAAAAATGATCGTAGAAAAGATTCACCTTCTGTAGATACTTCAGTACATTATATTCAGATTATTGACCCTAAGAAAGCACAGAATTTATCAATTCTGTTACGTGCTCTGAATGTTACAACAGAAGAAGTCGTCGATGCACTAAACGAAGGTAACGAGATTCCTGTGGAGCTCATCCAAACAATGTTGAAAATGGCACCTACACAAGAAGAGGAACTGAAACTTAGGTTATTCTCTGGAGAACTATCTCAACTAGGTCCAGCTGAGAGGTTTCTAAAAGTACTGGTTGACATTCCATTTGCTTTCAAACGTCTCGAAGCTCTCATGTTCATGTTGATTCTTCGAGAAGAGTCCTCAAGCATCAAGGATTCCTTTGCAACACTAGAGGTTGCTTGCGATAAACTGAGAAAAAGCAGGTTATTCTTAAAACTACTAGAAGCAGTACTCAAAACGGGAAACCGAATGAACGATGGTACATATCGCGGTGGAGCTCAAGCATTTAGGCTCGACACACTTTTAAAACTCTCGGACGTAAAAGGGACAGATGGAAAAACAACACTATTACACTTTGTGGTTCAAGAAATTATACGTTCGGAAGGAATAAGAGCAGTAAGAACGGAAAGAGCAAGCAGAAGCCTTTCAAGCGTAGCAACGGCGGATGCAGATTACGAAAACGAAGAATCAGAAGAGCACTATCGTAGCCTTGGACTTCAAGTAGTTTCAAGCTTGAACAATGAACTTGAAGATGTTAGAAAAGCAGCACTAATAGACGGTGATGCATTGAGTAACGCGGTTTCGAAAATCGGTCAATCGTTGGTTAAGAGCCGGGACTTTTTGAACACTGATCTTAAGAATTTGGAAGAAGAGAGTGAGTTTCAAATCTGTTTAGAGAGGTTTATGGATCATGCGAAAGGAGAGGTGACGTTGCTTGTTGAAGAAGAGAAGAGGATAATGGGGTTGGTTAAGAGTACAGCAGATTACTTTCATGGGAATTCAGGGAAAGATGAAGGGCTGCGTTTGTTTTTGATCGTGCGCGATTTTTTGATAATATTGGATAAGGTTTGCAAGGAAGTGAAAGAAGCTACATTGAAGTCTTTGAAGGCTTCCAATAAGAAAGAGACTCCGTCACCGGCAGTGTCAGTTCCGTCTTCTCCGGATGCACGCCAACGGTCTCAGTTGCCGCAGGGGCAGTCTTCTGATGTACATAGGCGATTGTTTCCGGCTATTGCAGGGCGAAGAGTGGATTATTCTAGCTCAGATGACGACGAAGATGGTAATTAG 2562 0.4305 MELTRTGCAVIYVILLCALAHGSSEGKEDDLYTDAPVSSPFLNIHGKQAKNVWKHCRKELTEKNNDVKGINLHPLEGSSDIHKKKKVLDCIRTSATPPAPISKSRASSANSPSPEHSLVAPIRLSTPTISSTPSPTPVPVPNPSTTPVPVPSTTPVPVPSTGIPYLPLPPDNLAPLPPSPRQYAPPSHIASVPITSPPSFKHDEEKKKAIILAASVSGIVVLIGLSLCYREAKTGKVEREDNHLLILTSNDYSGGPQMIVRLGDTNTEETGVIINKGKSSSSGRKWSMKGRDDNNITLAETSTSEDVGQVTSTSSRIPAPPPPGPPPPPPPQPPVLAPRPPPPPKSSHPPPAPPPKPMAGKNIGIPLGPLKQGSSTEGDAPKPKLKPFFWDKVNAKPDQSMVWHEINAGSFVFNEEMMESLFGCANQNKNDRRKDSPSVDTSVHYIQIIDPKKAQNLSILLRALNVTTEEVVDALNEGNEIPVELIQTMLKMAPTQEEELKLRLFSGELSQLGPAERFLKVLVDIPFAFKRLEALMFMLILREESSSIKDSFATLEVACDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERASRSLSSVATADADYENEESEEHYRSLGLQVVSSLNNELEDVRKAALIDGDALSNAVSKIGQSLVKSRDFLNTDLKNLEEESEFQICLERFMDHAKGEVTLLVEEEKRIMGLVKSTADYFHGNSGKDEGLRLFLIVRDFLIILDKVCKEVKEATLKSLKASNKKETPSPAVSVPSSPDARQRSQLPQGQSSDVHRRLFPAIAGRRVDYSSSDDDEDGN* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4542 853 Gene3D Formin, FH2 domain 381 804 IPR042201 -
Psa7g4542 853 PANTHER FORMIN-RELATED 1 851 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa7g4542 853 PANTHER FORMIN-LIKE PROTEIN 1 851 - -
Psa7g4542 853 MobiDBLite consensus disorder prediction 795 826 - -
Psa7g4542 853 MobiDBLite consensus disorder prediction 795 853 - -
Psa7g4542 853 MobiDBLite consensus disorder prediction 294 315 - -
Psa7g4542 853 Pfam Formin Homology 2 Domain 379 778 IPR015425 -
Psa7g4542 853 SUPERFAMILY Formin homology 2 domain (FH2 domain) 326 790 - -
Psa7g4542 853 MobiDBLite consensus disorder prediction 97 115 - -
Psa7g4542 853 MobiDBLite consensus disorder prediction 94 152 - -
Psa7g4542 853 ProSiteProfiles Formin homology-2 (FH2) domain profile. 375 804 IPR015425 -
Psa7g4542 853 MobiDBLite consensus disorder prediction 132 152 - -
Psa7g4542 853 SMART it6_source 375 793 IPR015425 -
Psa7g4542 853 MobiDBLite consensus disorder prediction 271 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4542 Psa-Chr7 377848953 377853828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4542 191 842 FH2 protein (formin) Gene Family AT5G54650 48.219 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4542 - - lja:Lj3g3v2888350.1 752.666