Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4489 ATGTTTGAACGGAAGCAGTTCAAGACAAGGTTATGCGCTCTCTATCAGAAAGGTCGCTGTAATCGCCTCAACTGTTCCTTTGCGCACGGGAATGCCGAGCTTCGACGTTTCTCTTCCTCATCTTATAATGGAAGGAAAGACTATTTAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCAATCACCTCCAAGATATTCACCAGCTCGTGACGCAAGAGGTCGACAGACTATTCGTGAATACAGTCCACCGAGGTCTCCAGACAAAAGAAGTGACAGAAGACATAAGAGAAAACAGGCCATCAGTTGCCAAAGTGATATATCTGTAAGTATAAAAGTCTCTGATAGAAATAATGATCAAGTTAAAGAAGGGAAGCTGCTTTCTTCTGGTTCTAGAAATACTCTTGAAGATCAGCTGAAGAAAGTACATTCTGATATCAAAACTCTTGAGAACCGAAAATTCCAATTGTCGGTCTACCAAGATGAGAGTGTTCGAGAGGTGGATAGCCTTAATTCTAGAGTTCAGGAGCTTGAGTCTCAGTTAAGCAAGGAGAACGAAGAGTATAAAAGAATTACTTCAAGAATAAGGAAGTTTGTTCGAATGTATAATCATAATTTGGAGTTGCAAGATGAACTGAAGAGATCACAGGTTCGACTCCAAAGGTTTGGAGACCACCTTTTCACAGACATTTCTAGAATTGGTGCTAGTGAGGAAGATTTAACTGTTGATATTGTAAGCAATGGTGAGAATACTGGTTTTCCTCCAATTACTAAACTTAGTTTGGAGCAGAATGGCGGATCTCCCTGCAGAAAAAGGCTGCATGTGGAACGAGATTCTGTGGAAGAGTTAAAACAAGATAAATCAAAAGTCGGCCATTTGGTTGAAACAGAAAGAAGTGGGAAGCGTTCTCGATGGAGTTTGTCTGCTAAAACAAACGATAAGGATTGTGAGGAGGCACCAGGCAATGGAATTGAAGTTACTAGACACCTAGATCTTGAAGGAAAATATAAGAAAGGAATATGGAATTCTTCAAACAATATTCATTCAGAAAAGCCAAAGGAATCCAGGATTGAAGTGCCGTCAACCAGCATGGCAGCTCATGTGTTCGATGAGGAAGTTGATATTGAACACGATAACGGAGCGGATATCATTGAAAATGCAAAGACAGAAAATGAGAATGGAGTGGAGTTCCATGCAAAGGGAATACCTCACATGCTTATCCCAGATTCGATTCCCCGTAGCAATTATTCGCAGTTTGAGGGTAAACGCGAGAATGTGGATGTGGATGGTCTTAATGAAGAGGCAGCAGGAGCACATATGAACTAA 1326 0.4095 MFERKQFKTRLCALYQKGRCNRLNCSFAHGNAELRRFSSSSYNGRKDYLGNDLRDKLDRRQSPPRYSPARDARGRQTIREYSPPRSPDKRSDRRHKRKQAISCQSDISVSIKVSDRNNDQVKEGKLLSSGSRNTLEDQLKKVHSDIKTLENRKFQLSVYQDESVREVDSLNSRVQELESQLSKENEEYKRITSRIRKFVRMYNHNLELQDELKRSQVRLQRFGDHLFTDISRIGASEEDLTVDIVSNGENTGFPPITKLSLEQNGGSPCRKRLHVERDSVEELKQDKSKVGHLVETERSGKRSRWSLSAKTNDKDCEEAPGNGIEVTRHLDLEGKYKKGIWNSSNNIHSEKPKESRIEVPSTSMAAHVFDEEVDIEHDNGADIIENAKTENENGVEFHAKGIPHMLIPDSIPRSNYSQFEGKRENVDVDGLNEEAAGAHMN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4489 441 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 436 IPR045868 GO:0046872
Psa7g4489 441 Coils Coil 160 194 - -
Psa7g4489 441 Gene3D - 1 36 - -
Psa7g4489 441 Coils Coil 132 152 - -
Psa7g4489 441 MobiDBLite consensus disorder prediction 48 103 - -
Psa7g4489 441 MobiDBLite consensus disorder prediction 48 89 - -
Psa7g4489 441 SUPERFAMILY Troponin coil-coiled subunits 128 196 IPR038077 -
Psa7g4489 441 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Psa7g4489 441 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 436 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Psa7g4489 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4489 - - aprc:113858008 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4489 7 371178765 371188512 Psa7g4489 7 371178765 371188512 ECH