Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4466 ATGAAGCGTGCGAGAAACACATGCGAGTCTAGCTCTTCTAGGGTTTCGCCAAGTCTCGAAGCAGGAGTCATCAAGAAGCTCCGGTTAGAGAATTTCATGTGTCATTCAAATCACGAAACCGTGTTTGGAAATCACGTTAATGTCATCACTGGACAAAACGGAAGTGGTAAAAGTGCAATACTTACTGCGTTGTGTGTTGCATTTGGTTGTCGAGCTAAAGGGACTCAAAGAGCATCTACTTTGAAGGATTTCATCAAAACTGGTGCTAGTAATGCTGTCATCCATGTTGAAATTCAAAATGAAGGAGAGGATGCTTTCAAGCCTGAAATGTACGGTGATGTTATCATTGTAGAACGTAGGATATCTGAGTCCACAAGCTCTATCACATTGAAAGATCACCAAGGAAAGAAAGTTTTCAGTCGGAAAGCAGATCTTCTGGAAATCATTGAACATTTCAATATTGATGTGGAGAATCCGTGTGTGATAATGAGTCAAGACAAAAGCAGAGAGTTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAACGATCTTCTGGAAAGCATTTCCATTGAAATAACTACTGCACGTGGAATAGTTGAAGAATTAGAGACTGCAATAAAACCTATAGAGAAGGAACTCAACGAGCTGCAGGTTAAAATTAAAACGATGGAACACGTTGAACAAATTTCCATACAGGTTCAGCAGTTAAAAAAGAAACTTGCCTGGTCATGGGTTTATGATGCGGACAAGAAACTTGAGGAACAAAATGTAAAGATCGAAAAGCTGAAGAGCCGGGTTCCTACTTGCCAAGCTAAGATTGATAAACAACTGCATCAGCTTGAAAAATTAAGTGAAAACTGTTCTGCGAAGAAAGCTGAAATTGCAAATATGATGACATCACAAGTAAAGCAAATGAAGGAAAATTTAAGTCGCACGATGTCCTTGGCCAAAAAAGAAGTATTTGAACTACAGCGAGACTGCAATCGCAAAACTAGTAACATACAGAAGATGGTACAACAGCTCAAAAGGCTTGAACTACAAATGCAGGATACTCACGAGCAGAATTTGAAAAATACCCAGGCTGAAGAATCTGACATGGAGGAAAAACTGAAGCGGCTTCAAGATGAGTTTAATGATGCTAAGTCCGAATATGATAGACTGAAAGAAGAAGAGGCTATGTTAATGAACAGCAAAAATGGGCAAACTGACGAAATCAGAAGGATTGATGTTAAGATCCAAGATCATGAAAAGAAGTATAATGAAATCATGCATAATATTCGCAATCTTAAAAACCAACAAAGCAACAAGATCACAGCTTTTGGAGGAAATAAAGTGATTAATCTGTTACGTATAATTGAGAGATATCATCAAAGGTTTAAGATGCCTCCTATTGGTCCAATTGGTGCCCATCTGAAGTTACGTGGTGGTAATAAATGGGCGGTTGCCGTTGAACATGCTATTGGGAGAATGCTCAATTCTTTTATAGTAACTGATCACAAGGATTTTCGTCTTTTGAAACAATGTGCAAAGGAAGCAAATTATGATCATCTTCAAATTATTATATATGATTTTTCAACCCCAAGGTTGATGATACCAGAGCACATGCTTCCTAATACAAACCATCCATCAACTCTTTCCATCTTACAATGCGAGAATCACACTGTGATTAATGTCTTAGTCGATCTGGGAAATGTTGAGAGACAAGTGCTAGTTAACGACTATAATACCGGGAAGGTTGTTGCCTTTGAAGAAAGGATCCAAAATCTGAAGGAGGTCTTCACTTTGGATGGTTGTAAAATGTTCTCGCGAGGTCCGGTACAGACAACTCTTCCTCCAAATAAGAAGCAGCGATATGGTCGTCTAACTAGTTCTGTTGAAGCTGATATTGAGAAACTTAATAATGATGCATCTAATGAGCAAAAATACGCAAATGACTATAAATGGAATAAAAGAGAGGCAGAGCGCAAGCTTGAGGATCTAGACAAGAAGATGAATTCTATAAAGAGACTTTGTATAAGTGCTGGAAGAACTTTTAGTTCTACTAAGCTAGCTTTGGAGGAGAAAACAAAGGAACAAGCTGCTGAACGTAGCTCGACACCTTTGTCCTCAGTTGATGAGATTGTTGAAGAAATTTCAGAAATAAACAAGAATATAAAAGAAGAGCAGGTGTTGTTAGAAGGCCTTGAACAGAGGAGGCATGAGGCAGTGGGAAAAGCAAATGACCTTAAAGTAAATTTTGACGAATTGTGTGAATCAGCGAACACTGAGCTTGCTTCACTTGAGAAAGCTGAGAGTGAACTTATGGAGATTGAAAGGGAAATAGATTCAGCAAAAAAGGCGAAGGATCATTATGATAATGTCATGAAAAACAAGGTCCTTCATGATATTAAGGAGGCAGAGGCACAATATCTGGAGCTTACAAAAAGTCGTGAGGTAAATGTTGAGAAAGCTACCATAATTTGCTGTCAGAATGAACTTGCTACGTTAGGAGGGTGTGATGGGAAAACCCCAGAGCAAATCAGTGCCCAATTAGAGAGTCTGAATCATACACTAAGGCGCGAGAGCCAAAGATACTCCGAATCTATTGACGATCTGAGGATGCTATATGCAAAAAAAGAACGAAAGATTGCAAAGAGGCAGCAAGTTTACAGAGCCCTTCGACAGAAATTAAATGCTTGTCAGAGTGCTTTGGAGTTTCGAATGAGAAAGTTTCAGGCAAATGCAACTAATCTCAAGCATCAGCTTTCTTGGAAATTTAATGGCCATTTGAAAAAGAAGGGGATCAGTGGAGTTATCAAAGTTGATTATGAGCAGATGACCTTGTCGATTGAGGTACAGATGCCCCAAGATGCATCAAACAGAGCTGTTCGAGACACACGGGGGCTTTCAGGTGGAGAGCGGTCTTTTTCAACTTTGTGCTTTGCATTAGCTCTTCATGAAATGACAGAGTCCCCATTCAGAGCAATGGATGAATTTGATGTCTTTATGGACGCAGTAAGCCGGAAAATTAGCATGGATACTCTGGTTGATTTTGCTGTGGCACAAGGGTCCCAGTGGATATTGATCACCCCACATGATACTAGCTTGGTGAAAGCAGGGAACAGGGTAAAGAAGATGCAAATGGCAGCTCCCCGTTCTTGA 3177 0.3957 MKRARNTCESSSSRVSPSLEAGVIKKLRLENFMCHSNHETVFGNHVNVITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGASNAVIHVEIQNEGEDAFKPEMYGDVIIVERRISESTSSITLKDHQGKKVFSRKADLLEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISIEITTARGIVEELETAIKPIEKELNELQVKIKTMEHVEQISIQVQQLKKKLAWSWVYDADKKLEEQNVKIEKLKSRVPTCQAKIDKQLHQLEKLSENCSAKKAEIANMMTSQVKQMKENLSRTMSLAKKEVFELQRDCNRKTSNIQKMVQQLKRLELQMQDTHEQNLKNTQAEESDMEEKLKRLQDEFNDAKSEYDRLKEEEAMLMNSKNGQTDEIRRIDVKIQDHEKKYNEIMHNIRNLKNQQSNKITAFGGNKVINLLRIIERYHQRFKMPPIGPIGAHLKLRGGNKWAVAVEHAIGRMLNSFIVTDHKDFRLLKQCAKEANYDHLQIIIYDFSTPRLMIPEHMLPNTNHPSTLSILQCENHTVINVLVDLGNVERQVLVNDYNTGKVVAFEERIQNLKEVFTLDGCKMFSRGPVQTTLPPNKKQRYGRLTSSVEADIEKLNNDASNEQKYANDYKWNKREAERKLEDLDKKMNSIKRLCISAGRTFSSTKLALEEKTKEQAAERSSTPLSSVDEIVEEISEINKNIKEEQVLLEGLEQRRHEAVGKANDLKVNFDELCESANTELASLEKAESELMEIEREIDSAKKAKDHYDNVMKNKVLHDIKEAEAQYLELTKSREVNVEKATIICCQNELATLGGCDGKTPEQISAQLESLNHTLRRESQRYSESIDDLRMLYAKKERKIAKRQQVYRALRQKLNACQSALEFRMRKFQANATNLKHQLSWKFNGHLKKKGISGVIKVDYEQMTLSIEVQMPQDASNRAVRDTRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISMDTLVDFAVAQGSQWILITPHDTSLVKAGNRVKKMQMAAPRS* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4466 1058 Gene3D - 743 1055 IPR027417 -
Psa7g4466 1058 Coils Coil 318 409 - -
Psa7g4466 1058 CDD ABC_SMC6_euk 24 178 - -
Psa7g4466 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 1051 IPR027417 -
Psa7g4466 1058 Pfam RecF/RecN/SMC N terminal domain 24 1053 IPR003395 -
Psa7g4466 1058 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 9 1058 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Psa7g4466 1058 Coils Coil 211 231 - -
Psa7g4466 1058 Coils Coil 655 682 - -
Psa7g4466 1058 Coils Coil 285 312 - -
Psa7g4466 1058 CDD ABC_SMC6_euk 962 1058 - -
Psa7g4466 1058 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 9 1058 - -
Psa7g4466 1058 SUPERFAMILY Smc hinge domain 429 616 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Psa7g4466 1058 Coils Coil 762 799 - -
Psa7g4466 1058 Gene3D - 23 229 IPR027417 -
Psa7g4466 1058 Coils Coil 257 277 - -
Psa7g4466 1058 Coils Coil 424 444 - -
Psa7g4466 1058 Coils Coil 881 901 - -
Psa7g4466 1058 Coils Coil 716 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4466 Psa-Chr7 368969334 368997394 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4466 21 1058 Structural Maintenance of Chromosomes family AT5G07660 56.923 0.0 1167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4466 K22804 - gmx:100816916 1546.56