Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4458 ATGATCAACACTAACACTAGTTGTCATGGAACAAATAACCATCCTATGATATATTATTTCCCCAAACCCTTTGAACAACAAGAAATCCAACAAAATCAAAACAATCAACTATCTTCTCTCAAACCCGCCGCTTGCATTAAAATCACAACGGCTCATTTTGATCTTGCTTACAACCATCCATCAGTTTCTAAACATTATGCAAGAGAGTGCGATCAACTACCAAATCTACAACCCCAAACTAGCTCTAAGATTTTATCAAATACAGATCCACAAGGAGTGCTATGCAAAAATAGGAAAAGAAAGTTTGATAATCAGAAGATAGTAGAATGGCATATGAGTGTAGAGAAGTTGGGTGAAGATCCATGGGAATGGAGAAAATATGGACATAAACCCATTAAAGGATCTCAACATCCAAGGTTTTTTCATATTTGTATAACTTTCACATATATTTTGTTTACTTTACCATTAAAATATTTTTTTTGCTGA 486 0.3374 MINTNTSCHGTNNHPMIYYFPKPFEQQEIQQNQNNQLSSLKPAACIKITTAHFDLAYNHPSVSKHYARECDQLPNLQPQTSSKILSNTDPQGVLCKNRKRKFDNQKIVEWHMSVEKLGEDPWEWRKYGHKPIKGSQHPRFFHICITFTYILFTLPLKYFFC* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4458 161 Gene3D WRKY domain 95 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g4458 161 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 10 144 - -
Psa7g4458 161 ProSiteProfiles WRKY domain profile. 113 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g4458 161 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 144 IPR044810 GO:0003700
Psa7g4458 161 Pfam WRKY DNA -binding domain 119 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g4458 161 SUPERFAMILY WRKY DNA-binding domain 115 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4458 Psa-Chr7 367757225 367757858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4458 96 146 WRKY Transcription Factor Family AT4G01250 45.098 1.57e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g4458 WRKY 7.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4458 K13425 - mtr:MTR_2g024380 114.005