Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4447 ATGGTTTGTGAGATGGAGAGTGATTGTATTGAAGATATGATGGATATTGAAGTTTTACCATCAATGTGGCCAGAGGATGTTGGAACTGATGTTGGAAAACAGTTTAACATAGAGAAACCAGGAAGAGATCAAGATATGTTGGAAGAAGTAACAATCTTAGAAGAACCAGCTATAGCTGATTTTCAAAGATTAATGGAGCTTACAAATTATACAGAAAAAGGGTCATCTCAATTGGCTTATTTAATGCAACATTGGGAGTATAAACAGGCGAATGCGGTTCGACTTCTCCGAGAAGAGCTCGACAATCTTAGTAAACAAAGGAAGGAAGTTGAGCTTAGAAAATTGGAGATACTTAAAGATAATAATCGATTCGAGGAAGAGAGTTATGGTGGAGATAAACGACCGGTTTCGATATTGGACGATGTTTACTATACATGGCAAGATCTACCGGTTGCGATAAGGAAAAGTGATGTTGTTGTTCAAAACAAGAGAATTGAAATTGAGGCTGAGTATGATACTGTTGTTTACTGGAAACATCGGTCGCGTGATTTGGAAAAACAGTTGGAGGCAAGTATTCGGAGAGAGGAGATATTAAAGGAGAAATTACAAGAAAGTATAGAGACTATTGAAAGACAATCTTCACCAGTGGAGGAACTGTCGCAGATTCTTAAGAGAGCAGATAATTTCTTACATTTTATACTTCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGTTTTATCTATAATCATTTTCCAAGCTTACAAGAGGAGGACATCATAGGAAAAACGGATGTCGAAATTTTCACGGGATCAGGTGTTAAGGAATCTCAAGATTTCAAAAGAGAAGTAATGGAGAAAGGAGTAGCTGCAAAAAAAGAAATTACTTTTGAGACAGAACTATTTGGAGCTAAGACATTTTTGATATATGTAGAACCTGTGTTTAGCAAAACCGGAGAAACAATTGGAGTGAACTATATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAGAATGGCTAAGCTAAGGGAAGAAATTGCAGTTCAGAAAGCTAAGGAAACAGAACTTAATAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCACCACTTTCTGGTGTTGTTAGCATGGCTGAAATTCTTACTACAACAAAAATTGATAGGGAGCAAAGACAGCTCTTGGATGTCATGATATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTTATCTTTCCAAAGTTGAGTCAGGTTAG 1323 0.3681 MVCEMESDCIEDMMDIEVLPSMWPEDVGTDVGKQFNIEKPGRDQDMLEEVTILEEPAIADFQRLMELTNYTEKGSSQLAYLMQHWEYKQANAVRLLREELDNLSKQRKEVELRKLEILKDNNRFEEESYGGDKRPVSILDDVYYTWQDLPVAIRKSDVVVQNKRIEIEAEYDTVVYWKHRSRDLEKQLEASIRREEILKEKLQESIETIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQDFKREVMEKGVAAKKEITFETELFGAKTFLIYVEPVFSKTGETIGVNYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILTTTKIDREQRQLLDVMISSGDLVLQLINDILYLSKVESG* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4447 440 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 372 440 IPR036097 GO:0000155|GO:0007165
Psa7g4447 440 Pfam His Kinase A (phospho-acceptor) domain 377 440 IPR003661 GO:0000155|GO:0007165
Psa7g4447 440 Gene3D - 357 440 - -
Psa7g4447 440 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 440 - -
Psa7g4447 440 CDD HisKA 377 436 IPR003661 GO:0000155|GO:0007165
Psa7g4447 440 SMART HisKA_10 375 440 IPR003661 GO:0000155|GO:0007165
Psa7g4447 440 Coils Coil 93 127 - -
Psa7g4447 440 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 440 - -
Psa7g4447 440 Gene3D PAS domain 215 352 - -
Psa7g4447 440 Coils Coil 346 366 - -
Psa7g4447 440 Coils Coil 181 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4447 Psa-Chr7 365505413 365508404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4447 1 440 Histidine Kinase Gene Family AT5G10720 66.591 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4447 - - cam:101512841 815.068