Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4438 ATGGATACTTTTTCTCACGTTCCCCCAGGTTTTAGGTTCCATCCCACAGATGAGGAACTTGTTGATTACTACCTAAGAAAAAAAATAGCTTCTAGAAGGATTGATCTTGATGTCATAAAAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTGTAGAGCTTTGCAGAATAGGAACAGAAGAACAAAATGAATGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGGACAAGAACAAATAGGGCAACTGCAGCTGGATTTTGGAAAGCAACTGGAAGAGATAAGGCAATTTATAGTAAGCATGATTTGATTGGAATGAGGAAAACATTGGTGTTTTATAAAGGTAGAGCTCCAAATGGACAAAAATCAGATTGGATAATGCATGAGTATAGGCTTGAATCAGATGAAAATGGCACACCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACAACACTTCGCAAAATGAATGAACATGACTCTCCTTGTTGGTATGATGACCAAGTTTCTTTCATGCAAGACATGGATTCACCAAACCAAACCTCTCAAGCAAATCCAATTTACCAACAACTTCCATATCCTTGCAAAAAAGAGCTAGACAATTCACCATATCAAAACCTACCTCGTGACCATTTTCTTAATCTCCCTCTTCTAGAGAGTCCAAAGCTTGCTCAATCTAATCCAATGGTGACAACATATGGTACTATAGATCATACAAATTCCATGCTTCCTTCACCAATGCTACTACAAGAAGAACAACATGTCTTGCAAACTAATCAACAAAATTTCCATGCTATGTATGGAAACAATTCCGATGTCGATGATCAAGTTACCGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCAACAAAAGACGACAATGACAACATGTTTCATGGCAATGTTGAGTTCAGAAATTTGGAGAAACAAGAAATGGTGCCTCATGAAAATGCCTCAACATCAAACTCAACTTGTCCTATTGATTTGTGGAAATAG 1041 0.3727 MDTFSHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLVELCRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGTPQEEGWVVCRVFKKRVTTTLRKMNEHDSPCWYDDQVSFMQDMDSPNQTSQANPIYQQLPYPCKKELDNSPYQNLPRDHFLNLPLLESPKLAQSNPMVTTYGTIDHTNSMLPSPMLLQEEQHVLQTNQQNFHAMYGNNSDVDDQVTDWRVLDKFVASQLSQDATKDDNDNMFHGNVEFRNLEKQEMVPHENASTSNSTCPIDLWK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4438 346 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Psa7g4438 346 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Psa7g4438 346 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Psa7g4438 346 MobiDBLite consensus disorder prediction 328 346 - -
Psa7g4438 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 331 - -
Psa7g4438 346 MobiDBLite consensus disorder prediction 327 346 - -
Psa7g4438 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 331 - -
Psa7g4438 346 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4438 Psa-Chr7 364865538 364867745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4438 1 346 NAC Transcription Factor Family AT1G12260 56.510 9.38e-131 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g4438 NAM 7.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4438 - - gmx:100815845 540.421