Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4420 ATGGCTTTTCACTATAAGCTCTTGTTTGTTTCTTTATTTTTCCTTTCTTTTATTCTTTTTCTTCCTAACATAAACACACTATCAACTGTTTCAATTTCTGACTCTTCGAATTCCAACCAAACCTTAATTTGTGTCTTACAACAACCTCAAAACAAACAAAAACATTCAAATCTCAATTGTACTACTTTTCCTTCTAGTACTATTATTAACCTTGAAGTGAATCCTAATGTTCCATTTTCTCAGATTGTTGGTGGAAATGGTTTTCTATATGCATTAGCACCATCATTAAACTCTTCAAATTCCATCTTAGGTTGTTGGAGATTCTCAAACTATTCAAACTCCACTATTGTTCCGTTTAAACGAATCTATCATGGACCCTTCATTGAAGACGTTGATAGTGGAAACTCCCATGTTTGTGGTCTTGTGAAAGCGAAAAACGGTTTTCGCCTCGAGTGTTGGCAATGGAAAAGCTTCAATTCAATCAGTCCAAGCTTGAGTTTTTCAAGTATTGCAGTGGGAGAGAATTTTGTATGTGGGATAGTAGAAAATGGAAAAGGGAATTTTGTTACTTGCAGAGGAAGTAACAAAGAAGTAGTTGGAAATGAACCGAAGAACGGTGGGAATTATTCGGTAATCGAAGCCGGTTCGAATCACGTTTGTGTGATTTCTAGTGGTGGTGGTTTGGAATGTTGGGGTGATGTGGTTGGTGAGAAACCAAGAGGGAGATTCATTGGATTGGCTTTGGGAGAGAAGAGAAGTTGTGCACTTGGGTATGATGGATTAGTTGAATGTTGGGGGTTGAATAATTTCACCATGCCATTGAGATTGAAAGGAGCTTTTTTTGAATCGATTGTGGCTAAAAAAAGTGTTTTTTGTGGTGTTTTAGCTTCTAATTACTCTTTGTTTTGTTGGGGGAATGAGGTTTTTGAGGAGTTGAAAAATGCGATCAAGGTGTTTGATAATGTGCTTCCTGGACCTTGTAAGAGTCGATGTCCGTGCGGGCCTTTATCAGATTCTGCTAAGCTTTGCATCTCGCCGGGCATTATTTGTAAAGCTTGTCCACCGTTAGTTGAGTATCTGTCATCGCCGCCGTGGAATCCTCCATCTACGGTTGGAAATTCGTCGAAAAATGGTGGTTGGAGCAGCAAGATGGTGGCGTTTCTTGTGATCGGATGCGTTGGCTGTAGTTCGTTGTTGCTGGTTTTATCTTGCTTTCTTTACAGACACTGCAAAGACTTGGGATGCAAATCTAGAGTTCATGACTCGGGAAGATTAGACGATCCTGATCCCGAAACCGAATTAGAGCCTCCTCGAGGCATCCCGGTTCTTGAGAAGCGGTTAAGTCATGTAATCAGTATGGGAAATGGAGGCACCCTTTTGGAGGAATTTTCCTTTCAAAAACTAATTCAAGCGACCAACAATTTCTCCGAACAGAACAAAATTGGCCTAGGAAGTTTCGGGTCGGTGTACCATGGAAAACTCGAAGAAGAAGGAATCGAAGTTGCCATAAAAAGAGCTGAAATGTCGTCAACTTCAACTTCTTGTGCACATTTCGGTGTCGCGAGAAGACAAGAAGACCAAGACAGCGCCTTTGTGAACGAACTCGAATCTTTATCGAGACTCCACCACAAAAACTTGGTAAAATTACTCGGTTTCTACGAAGACAAACATGAGAGAATCTTAGTTTACGAATACATGAACAACGGAAGCTTAAACGACCATCTTCACAAGTTTCCAACCTCAACCATCATGTCATGGAGCGTCCGTATAAAAGTCGCCTTAGACGCGGCTAGAGGTATAGAATATTTACACAGATACGCCACACCATCGATTATCCACCGTGACATTAAATCATCAAATATTTTACTAGACTCAAAATGGGTTGCAAAAGTTTCGGATTTTGGATTATCATTAATAGGTCCAGAAGATGAAGAGTCACATCTTTCACTTCTAGGAGCCGGAACAGTCGGTTACATGGACCCCGAATACTATAGACTACAACACTTGACGACGAAAAGCGATGTCTATAGTTTCGGAGTTGTATTATTAGAACTTTTAAGTGGCTATAAAGCCATACATAAAATTGAAAATGGAGTGCCAAGAAATGTGGTTGATTTTGTGGTACCCTTTATTGTTCAAGATGAGATTCATAGGGTTTTGGATCCAAAGTTGCCACCACCAACACCATTTGAGATAGAAGGTGTGGCTTTTGTAGGTTATTTGGCTTGTGATTGTGTTCGTTTAGAAGGGAGAGATAGACCAAATATGAGCCATGTTGTGAGTAGTTTGGAAAAAGCTCTTGAGGCTTGTTTGGCAGAACCTATTCTTTGTGGGTCCAATTCTACCACCACAGTTTCTTCTTGTGACTGA 2370 0.4025 MAFHYKLLFVSLFFLSFILFLPNINTLSTVSISDSSNSNQTLICVLQQPQNKQKHSNLNCTTFPSSTIINLEVNPNVPFSQIVGGNGFLYALAPSLNSSNSILGCWRFSNYSNSTIVPFKRIYHGPFIEDVDSGNSHVCGLVKAKNGFRLECWQWKSFNSISPSLSFSSIAVGENFVCGIVENGKGNFVTCRGSNKEVVGNEPKNGGNYSVIEAGSNHVCVISSGGGLECWGDVVGEKPRGRFIGLALGEKRSCALGYDGLVECWGLNNFTMPLRLKGAFFESIVAKKSVFCGVLASNYSLFCWGNEVFEELKNAIKVFDNVLPGPCKSRCPCGPLSDSAKLCISPGIICKACPPLVEYLSSPPWNPPSTVGNSSKNGGWSSKMVAFLVIGCVGCSSLLLVLSCFLYRHCKDLGCKSRVHDSGRLDDPDPETELEPPRGIPVLEKRLSHVISMGNGGTLLEEFSFQKLIQATNNFSEQNKIGLGSFGSVYHGKLEEEGIEVAIKRAEMSSTSTSCAHFGVARRQEDQDSAFVNELESLSRLHHKNLVKLLGFYEDKHERILVYEYMNNGSLNDHLHKFPTSTIMSWSVRIKVALDAARGIEYLHRYATPSIIHRDIKSSNILLDSKWVAKVSDFGLSLIGPEDEESHLSLLGAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLSGYKAIHKIENGVPRNVVDFVVPFIVQDEIHRVLDPKLPPPTPFEIEGVAFVGYLACDCVRLEGRDRPNMSHVVSSLEKALEACLAEPILCGSNSTTTVSSCD* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4420 789 Gene3D - 64 326 IPR009091 -
Psa7g4420 789 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 9 786 IPR044815 GO:0004674
Psa7g4420 789 Gene3D Phosphorylase Kinase; domain 1 452 565 - -
Psa7g4420 789 ProSiteProfiles Protein kinase domain profile. 475 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4420 789 ProSitePatterns Protein kinases ATP-binding region signature. 481 504 IPR017441 GO:0005524
Psa7g4420 789 SUPERFAMILY Protein kinase-like (PK-like) 456 763 IPR011009 -
Psa7g4420 789 PANTHER OJ000114_01.11 PROTEIN 9 786 - -
Psa7g4420 789 Gene3D Transferase(Phosphotransferase) domain 1 566 773 - -
Psa7g4420 789 Pfam Protein kinase domain 476 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4420 789 SUPERFAMILY RCC1/BLIP-II 119 313 IPR009091 -
Psa7g4420 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Psa7g4420 789 SMART serkin_6 475 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4420 789 CDD STKc_IRAK 481 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4420 Psa-Chr7 363451168 363453948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4420 26 774 Receptor kinase-like Gene Family AT5G47850 50.395 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa7g4420 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4420 - - pvu:PHAVU_011G003100g 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4420 7 363451168 363453948 Psa7g4420 7 363451168 363453948 ECH