Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4418 ATGAGGCCTGATCAATTGCATGTTGCACAACAAATTAGGCGTGATAAATTAAGGATCCAGAATCAAGAGTTTCCTCACAACAACAACAACATAGAACAGTTATTATCATTACACCAAGCACCACAACAAGGATTCAACATGGATCTTCATCATCAACTAAGGAATTCCAACAACAACAATATACTTGATGGTGAAGATGATGATGATGGTGAAGCTGGTCTCTATTCATCTGATCAAATGATGAACAGTTTGAATCTGTTACACAGAAACCCTTTGGAGTACTGTTATGAGGCTGCTGAACCAAGTAACAACAATAATAGGTTGAGTTATTATTATGCAAATGAAACGAATCAGAATGTTTTTTTGCCTTCTGAGATTAACCATAGTGATACTACTACTTCAGAAGTTGCTTCCTTAATGCATCATGGTGTTTGGGGAGGTGGGAATAGTCATAATTTGTTCCATGAAAATCAAGCTAGTTTGTGGACTAATAGAGGTGTTATAGTTGACAACAACAACAACAACAACATCATCAACAACAGCATGGGTTTGTCTTTCTTTAATGATTGTAATAATCCTCAAGCTCAAGGTTTATCTTTGTCACTTTCATCAAATTCTTCACAACCTAAACCTTCACCTTCTGCTTCAAATTTTGAGCAAGGATCTTTCATAAATGTTGTGAAACCAGTTCATCAAGCAGAACCAATGGGAATTTCTTCACACAGTACTACTACAACTACAAGTAGTGGTTTTAGGAATGTTGGTCCTCTTGGACCCTTTACTGGTTATGCAACAATATTGAAAAGTTCAAGGTTCTTAAAACCTTGTCAACAGTTGTTAGAGGAATGTTGCTGTCAATCTGGTGTAAACATTGGTAAACCGTGTGAAAATGTTCCAAAATGGGTTTCTCGAGATGTTGTTAATGTTAATGTTGAAGATGATGAAACTGGAAAAGGTAGTAGTAGTTCAGGTGGTTCATGCTCTATGTTTTATGGTTCAAAAGAGAAAGAGAATAGTGCTGGTGCTGCTGATGATGGAGGAGGAGTTGGGAATAGTTTTTGTCTTTCATCTTCTGCTTCTCGACCTGAGTGCCAAAAGAATAAGGCTCAACTACTGTTCATGCAAGAAGAGGTTACAAGAAGATACAAGCAATACCATCAACAAATGCAAATGGTGGTTTCGTCATTTGAGTCAGTAGCAGGTCTAAGTTCAGCTACACCATACATTTCAATGGCGCTCAAGTCACTATCAAGACACTTCAGATGCCTTAAAAATGCTATCACAGAGCAACTCAAGCATACATGTCAAGTATTGGGAGAGGACTTTTCAATACTACCACCAACCACCACATGTAGTAGTACTAAATTTGACAGTAGTAATATGACAAGGCTAAGGTTCATGAATCATAGCTTACACAAGAACAGTAATATTGACTTTGTTGAACCTCAACAACATGTTTGGAGACCACAGAGAGGCTTACCTGAACGATCAGTGGCCATTCTTAAAGCTTGGTTGTTTGAGCATTTTCTTCATCCGTATCCTACAGATACAGATAAACACATGTTGGCTACACAAACAGGTCTATCAAGAAACCAGGTATCAAATTGGTTCATAAATGCCCGAGTTCGTGTATGGAAACCGATGGTAGAGGAAATACACATGCTTGAGTCAAAAGGCACAACAGAAGCACAGAATCAGAACAAAAACAAAACCGAGCCCTGCAGAGTTGGAACACATGAAAGGAAATTCCAGTGTTTGGAAGTGGGGTCATCATCTTCAGGCATTCACAACGTTGAAGAGCAATGGAATAATAATATTCAAGACAAGAGATCTAAAATGGAAAATGAGATTACACCAAACATGGATATGGGTTTTCTGCCTTATCAAAATGGATCTGTGTCACTGACATTGGGCCTTAGACATGGAGTTGAAAATGTACAACAGCAACAGTTGCAGCAGGAGGTAGAGCTTAGACACCAATATGGAGGACACATGATCCATGATTTTGTGGGTTGA 2016 0.3839 MRPDQLHVAQQIRRDKLRIQNQEFPHNNNNIEQLLSLHQAPQQGFNMDLHHQLRNSNNNNILDGEDDDDGEAGLYSSDQMMNSLNLLHRNPLEYCYEAAEPSNNNNRLSYYYANETNQNVFLPSEINHSDTTTSEVASLMHHGVWGGGNSHNLFHENQASLWTNRGVIVDNNNNNNIINNSMGLSFFNDCNNPQAQGLSLSLSSNSSQPKPSPSASNFEQGSFINVVKPVHQAEPMGISSHSTTTTTSSGFRNVGPLGPFTGYATILKSSRFLKPCQQLLEECCCQSGVNIGKPCENVPKWVSRDVVNVNVEDDETGKGSSSSGGSCSMFYGSKEKENSAGAADDGGGVGNSFCLSSSASRPECQKNKAQLLFMQEEVTRRYKQYHQQMQMVVSSFESVAGLSSATPYISMALKSLSRHFRCLKNAITEQLKHTCQVLGEDFSILPPTTTCSSTKFDSSNMTRLRFMNHSLHKNSNIDFVEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLESKGTTEAQNQNKNKTEPCRVGTHERKFQCLEVGSSSSGIHNVEEQWNNNIQDKRSKMENEITPNMDMGFLPYQNGSVSLTLGLRHGVENVQQQQLQQEVELRHQYGGHMIHDFVG* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4418 671 Gene3D - 490 552 - -
Psa7g4418 671 ProSiteProfiles 'Homeobox' domain profile. 484 547 IPR001356 GO:0003677
Psa7g4418 671 SUPERFAMILY Homeodomain-like 489 553 IPR009057 -
Psa7g4418 671 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 27 643 - -
Psa7g4418 671 SMART prehox3 261 429 IPR006563 -
Psa7g4418 671 SMART HOX_1 487 551 IPR001356 GO:0003677
Psa7g4418 671 CDD homeodomain 487 548 IPR001356 GO:0003677
Psa7g4418 671 Pfam Associated with HOX 266 428 IPR006563 -
Psa7g4418 671 Pfam Homeobox KN domain 504 543 IPR008422 GO:0003677|GO:0006355
Psa7g4418 671 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 27 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4418 Psa-Chr7 363180285 363186883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4418 252 557 Homeobox Transcription Factor Family AT5G02030 46.452 1.07e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Psa7g4418 POX 2.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4418 - - cam:101502049 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4418 7 363180285 363186883 Psa7g4418 7 363180285 363186883 ECH