Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4414 ATGAAGTCACAGATCAAAGTTACTCTTGCTATTATTATTAGTTTGCTCTGGATTCAACACTCCTTTTGTGATGAAGCATCTGATACAGCTAGCCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCGAAGGAAACCAAAGCAACTCTCTTGCTAATTGTTCGAAGTCATGTGATTGCCATTCAGATGCTGTAGAGGGTGGTGCATCCATATGGACATGCATATGTGATCCCAATGGATTTCCTCAAGTGGCAGAAGATGGTCATAGTGCTAAGTGCTTTCATGCTTGCAACTGCACGTGGGGAACTGTCAGCACGTCATCAGGTTCAAAGAAACACATTTCCAGCAAGGTTGTTGTAATTGTCCTATTAATATGTGTTATATGCACAACCATTGCGTTGCTTACCACAGTTGTATGCTACATCTACCGAAAGAAGCAATACCATATTCAATCACCAATATTCTCAGTAGATAAGGAAACAAGTAGTGGTAGTACCGCCAACCTAATCAGTCATCGGACAGGAACTTCTTCAGTACCAGAAACAACGTTTTTTGTGAATTCTCCTATTTGTCATATCACGGGATGCTTTACGAAACCCTCTTTTTTGTTTGGGAGCCAAAAAGAAACTTTTCATGGAAATATTACTCAATTTTCATTTGGTGAACTAGAAAGTTCCACTGATAACTTTTCAGCTACCAACCTTATTGGAGTAGGCGGAAGTAGTTATGTATACCGTGGTCGGCTGAGAGATGGTAACATTGTGGCAGTTAAGAGACTAAAAGATCAAGGAGGGCCAGAAGCAGATTCTGCATTTTTCAAGGAGATTGAATTAATATCTAGACTTCATCATTGTCATTTGGTGCCTTTGCTTGGATACTGCTTAGAATCGAAAGGAAAACACATGCAGAGGTTACTAGTATTTGAGTACTTAATTAATGGAAGTTTGAGGGACTGGTTAGACGGAGTTTCTGGAAAATACCTGGATTGGACTACTCGTGTTACGATTGCAATAGGAGCAGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAAAATTCTTCATAGGGATGTGAAGTCAACCAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATTACCGATCTTGGTATGGCGAAAAACTTGAGATCTGATGACCTACCAAGCGGTTCAGATTCTCCAGCAAGAATGCAGGGGACATTTGGCTATTTTGCACCCGAGTATGCTATTATTGGTAGAGCCTCGCTTGAATCAGATGTCTTCAGTTTTGGTGTGGTACTTCTTGAGCTTATCAGTGGTCGACATCCTATTCATAAAACTACCGGCAAAGAAGAAAGCCTTGTTATATGGGCTTCTCCTCGTTTACAGGATAGTAGGCGAGTAATATCGGAGATAGTTGATCCACAATTAAAAGGAAACTTCCCAGAAGAAGAGGTGCATATAATGGCATATCTAGCAAAGGAATGCTTGCTGCTGGATCCCGACACTCGACCAACCATGAGCGAGGTTGTTCAAATTCTTTCTAGTATTTCACCGGGCAAATCAAGGAGGAGAAGAAACATTCCCACCAGCTTGTTTCAGGAACCAGAGGATGTAGAAACGAAAAGGCAAGCACAATCCGGTGAATTTCCAACTCATAATTTATCACCACTAGACACCGATTACAATCGGTGTCTTGGAAACAAAAATAGAGAAGAAGATGCAGTTTCAGCTGAGTATATGGAAAGTTTGATCCTCTTAGCATCTAAGTCTAATAGCTCACATTCATCAGAAGAGGAAATGGTAGACATAACTGAGCCCCGGTTCGAATCATTTTGCATGACAAATGGCACTGTGACTTGA 1845 0.4092 MKSQIKVTLAIIISLLWIQHSFCDEASDTASLNKWKCRCSSFEGNQSNSLANCSKSCDCHSDAVEGGASIWTCICDPNGFPQVAEDGHSAKCFHACNCTWGTVSTSSGSKKHISSKVVVIVLLICVICTTIALLTTVVCYIYRKKQYHIQSPIFSVDKETSSGSTANLISHRTGTSSVPETTFFVNSPICHITGCFTKPSFLFGSQKETFHGNITQFSFGELESSTDNFSATNLIGVGGSSYVYRGRLRDGNIVAVKRLKDQGGPEADSAFFKEIELISRLHHCHLVPLLGYCLESKGKHMQRLLVFEYLINGSLRDWLDGVSGKYLDWTTRVTIAIGAARGLEYLHEAAAPKILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSGSDSPARMQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELISGRHPIHKTTGKEESLVIWASPRLQDSRRVISEIVDPQLKGNFPEEEVHIMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRRNIPTSLFQEPEDVETKRQAQSGEFPTHNLSPLDTDYNRCLGNKNREEDAVSAEYMESLILLASKSNSSHSSEEEMVDITEPRFESFCMTNGTVT* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4414 614 SUPERFAMILY Protein kinase-like (PK-like) 209 508 IPR011009 -
Psa7g4414 614 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Psa7g4414 614 ProSiteProfiles Protein kinase domain profile. 229 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4414 614 Gene3D Phosphorylase Kinase; domain 1 203 309 - -
Psa7g4414 614 Pfam Protein kinase domain 232 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4414 614 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 608 - -
Psa7g4414 614 PANTHER OS01G0253100 PROTEIN 2 608 IPR045271 GO:0004714|GO:0006468
Psa7g4414 614 Gene3D Transferase(Phosphotransferase) domain 1 310 526 - -
Psa7g4414 614 CDD STKc_IRAK 235 511 - -
Psa7g4414 614 MobiDBLite consensus disorder prediction 515 544 - -
Psa7g4414 614 MobiDBLite consensus disorder prediction 522 538 - -
Psa7g4414 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Psa7g4414 614 SMART serkin_6 229 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4414 Psa-Chr7 362551266 362559045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4414 1 610 Receptor kinase-like Gene Family AT2G28250 50.487 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Psa7g4414 Pkinase 5.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4414 - - gmx:100817870 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4414 7 362551266 362559045 Psa7g4414 7 362551266 362559045 ECH