Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4395 ATGGAATTAATGTCGCTAACACCACCATGGCTTGAACGATTATTATCGACAAAATTCTTCTCTCCCTGCAAAGCTCATTTCAACGCACCGCGAAACGAATGTAACATGTATTGTCTCGATTGTAAGGAATCATTCTGTTTTTATTGCAAACAGTCATGGCATAACGATCATCAAGTAATTCAAATACGAAGATCGTCTTATCACGACGTTGTGAGGGTGGCTGAGATTCAGAAGGTATTGGATATTAGTGGAGTTCAAACATATGTGATTAACAGTGCTAGAGTGATTTTTATTAATGAGAGGCCACAAAATCAGATTAAGACTACTAATGCTGTTATTAGTGCAAGTAAAACCAATTCACATTTGTGTGAAATTTGCACTAGATATCTATTGGACCCTTTTCGTTTCTGTTCTTTGGGTTGCAAGCTTGTAGGAATAAAGAAAAATGGGAATGCAAGCTTTATCTTAAGCACAAAGAAAGAGGAAGAAATAGGGAAAATGCAGGAAAGAAGGTTGCTATCAAAGGAAGAAGACGAAGAAATATTAATAATGCGTGAAGGAATCCACAAACAACAAGTATACAAAAGCACGTTTTCTCCTTATTCATCTCAACAAGCTTATTCAAATTCAAGGAGAAGAAAGGGAATACCTCATAGGGCACCTTTAGGACCTTAA 675 0.3659 MELMSLTPPWLERLLSTKFFSPCKAHFNAPRNECNMYCLDCKESFCFYCKQSWHNDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVIFINERPQNQIKTTNAVISASKTNSHLCEICTRYLLDPFRFCSLGCKLVGIKKNGNASFILSTKKEEEIGKMQERRLLSKEEDEEILIMREGIHKQQVYKSTFSPYSSQQAYSNSRRRKGIPHRAPLGP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4395 224 SUPERFAMILY B-box zinc-binding domain 23 64 - -
Psa7g4395 224 ProSiteProfiles Zinc finger B-box type profile. 23 62 IPR000315 GO:0008270
Psa7g4395 224 Gene3D Classic Zinc Finger 22 65 - -
Psa7g4395 224 Pfam PLATZ transcription factor 63 143 IPR006734 -
Psa7g4395 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 222 - -
Psa7g4395 224 MobiDBLite consensus disorder prediction 199 224 - -
Psa7g4395 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4395 Psa-Chr7 361216941 361218980 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa7g4395 PLATZ 7.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4395 - - aprc:113859745 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4395 7 361216941 361218980 Psa7g4395 7 361216941 361218980 ECH