Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4381 ATGGACTCACCAATGGAGTTTTGGGGCGTTGAGGCTAAAGTTGGACAATCTGTTAAAGTTGATCCAAATGATGAATTTGAGGGATACATCCATATTTCCAAGGTTGCACTTGGAGAGTTTAAGAAAGGAAAAGCAAGTGAACCTGTTGTTGTGTACGTGAAAGTTAAAGATCAGAAGATTGTTCTTGGAACTCTTATTAAGGATGAGATTCCTCAGATTTCCCTGGATATAGTTCTAGAACAGGAGTCTGAACTTTCCCACAATTCAAAGAATGCTGCTGTTTATTTTTCTGGATACAAAGTTTTTCGCCCTGATGATGAATCTGAAGGCTCCGAGTCTTCTGATAGTGATGAAGAACTTGCTCCTTTGGAGGAAAATGTAAAGGTGGAGGCTGATAAATCTGGAAAACCTATTGCTGAAGTTGATGCATTGACAAAGCAAGTCAAGATTGTTGATCCAACTAATGGAAAGATTGCTGATCCAGTGAAACATGAAGATGAATCTGATGATGAATCAGATTCGGATTTTTCTGAGGACGAAATTTCCGATGATGAGATTGATACTGATAGTGATACTGATAAAAGTGACCAAAATGTTACGGATAGTGATACAGATAGTGACGAAGAGACTCCTGCTAAGATTGACTCTGATAGTGATGACAGTGAGAGTGAACAAGACGCTAGTCCAAAAAGTCTTGATGCTGATACTACTGGTACTGACAGTGATACTGATAGTGAAGAGGAGACTCCTGCTAAGGTGGTGACTCAGGGCAAGAACAACAAGAGAGGAATTGGTGCTGGATCACAAACTCCAGTTCCCGCCAAGAAAGCTAAGAAGGCTACTCCTGAAAAGACTGACGGTAAAAAAGGTGTACATATTGCAACTCCCCACCCTACAAAGCAGAGTGGAAAATTTCATCAGAATGCTGCAAAGGGCCAGACTCCCAACTCTAGCAAGCCTGGTCAACAAAGTAAAAAGTCCAAGCAAGGTCGTCGGTGA 999 0.4124 MDSPMEFWGVEAKVGQSVKVDPNDEFEGYIHISKVALGEFKKGKASEPVVVYVKVKDQKIVLGTLIKDEIPQISLDIVLEQESELSHNSKNAAVYFSGYKVFRPDDESEGSESSDSDEELAPLEENVKVEADKSGKPIAEVDALTKQVKIVDPTNGKIADPVKHEDESDDESDSDFSEDEISDDEIDTDSDTDKSDQNVTDSDTDSDEETPAKIDSDSDDSESEQDASPKSLDADTTGTDSDTDSEEETPAKVVTQGKNNKRGIGAGSQTPVPAKKAKKATPEKTDGKKGVHIATPHPTKQSGKFHQNAAKGQTPNSSKPGQQSKKSKQGRR* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4381 332 MobiDBLite consensus disorder prediction 105 332 - -
Psa7g4381 332 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Psa7g4381 332 MobiDBLite consensus disorder prediction 121 139 - -
Psa7g4381 332 MobiDBLite consensus disorder prediction 192 211 - -
Psa7g4381 332 MobiDBLite consensus disorder prediction 252 266 - -
Psa7g4381 332 MobiDBLite consensus disorder prediction 300 324 - -
Psa7g4381 332 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 217 327 - -
Psa7g4381 332 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 216 - -
Psa7g4381 332 MobiDBLite consensus disorder prediction 277 293 - -
Psa7g4381 332 MobiDBLite consensus disorder prediction 166 191 - -
Psa7g4381 332 Gene3D Nucleoplasmin core domain 2 105 - -
Psa7g4381 332 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 217 327 - -
Psa7g4381 332 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4381 Psa-Chr7 359853588 359857194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4381 5 109 C2H2 Transcription Factor Family AT5G03740 48.571 3.38e-26 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4381 7 359853588 359857194 Psa7g4381 7 359853588 359857194 ECH