Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4379 ATGTCCAACAAAAACCATAATCACACATTTCCGATTTCAGCTACTTTGTTGATTTTCTTGTTGCTAAATCTATGTCAAGAAACTTCAGGGCTAACACAATATGAGGCCTTGTTAAAGTGGAAACAAAGTCTCCCTCAACAACCAATTCTTGATTCATGGATCATTAACAACTCAACTTCAACACAATCACCATGTTCATGGAGAGGTATCACTTGTGATTCAAAAGGTACTGTCACAATTCTAAACTTGGCATATACTGGACTTCAAGGTACTCTTAATCACTTAAACTTATCCGTTTTTCCAAACCTTCTTCGTCTCGATCTTAAAACTAACAATCTCACCGGTATTATACCAGGAAATATTGGTGTTCTTTCGAAACTCCAATTTCTTGATCTTTCTACTAATTATTTCAATGGAACTTTGCCTCTTTCTATATCTAATTTGACTCAAGTTTACGAGCTTGATGTTTCGAGAAACGATGTATCTGGTATATTAGATAGTCGTTTGTTTCCTGATAAGCCCAGTTCTAAAATTGGACTTATTGGGATTAGGAATCTTCTTTTTCAAGATACTCTCTTAGGGGGTCCGTTGCCGAACGAAATAGGGAACCTAAAAAACTTGACTTTACTTGCACTCGACGCAAACAATTTCTCCGGCCCTATACCTTCGTCTCTTGGAAACTGTAAACATTTAAGCATTCTTAGATTGAATGAAAACTATTTCACCGGACCGATTCCGCCGAGTTTAGGTAAATTGACCAATCTAACCGATCTTCGGTTTTTCATCAACGAATTAAATGGTACCGTGCCACAAGAATTCGGAAACCTCTCTTCTTTGGTCGTTCTACATCTTGCTCAAAACAATTTCATTGGTGAGTTACCACCACAAGTGTGCAAAAGTGGAAAACTTGTGAATTTCAGTGCAGCCTATAACAGCTTCACAGGTCCAATTCCAAGAAGTCTTAGAAACTGTCCTTCTTTGTATAGAGTTAGACTTGAGTACAATGAGTTAACTGGTTATGCAGATCAAGATTTCGGAGTTTATCCGAATCTTACTTACATGGATTTCAGCTATAATAAGGTTGAAGGTGATTTATCTTCTAAATGGGGGTCCTGCAAAAACTTGCAGTTACTCAAAATGGCTGGTAATTCGGTGGATGGTAACATTCCAAGTGAGATTTTTGAATTGAAACAATTACACGAGCTTGATCTATCCTTTAACAAGTTATCCGGAACTATTCCTTCGCAAATTGGAAACTCTTCGAATTTGTATACTTTAAATTTGGGCGGAAATAGGCTTTCTGGTAAGCTACCGATTGAAATCGGAAGGCTTTCTAATTTGCAACATTTAGACCTTTCGATGAACATGTTGTTGGGAGAAATTCCATCTCAGATAGGAGATTCTTCCAATTTGCTGAATTTAAATTTGAGTAATAATCACTTGAATGGAACAATTCCATTCCAAATTGGAAAACTTGCATCTTTACAAGACTTTTTGGACTTGAGTTACAATTCGATTTCCGGGGAAATTCCTTCTAATATTGGCATGCTTTCGAATCTGATAAGCTTGAATATTTCAAACAATAATTTATCAGGTTCTATTCCTGATGAAATTGGTGGAATGTTGAGTTTGTCAAATCTTAACCTCTCTTACAATAACTTAGAGGGTCATGTTCCTAAAGGTGGCATATTCAAAGTAAATTCTTCTCATGCACTTGACTTGAGCAACAATCAAGGTCTATGTGGTAAATTCCAAGGTTTGAAACCTTGTAATGTATCACTCATTGAACCTAGTGATGGAAGTAAGAAAAAAAAGGTTTGGATTCCAATTGTAGCTTCTTTAGGTGGTGCACTTTTTCTATCATTGGTGTTTGTTGGTATATTTTTCTTGTGCAACAAGAAAAACTCAAGAACTTCAAGACAAAAAAAGCTTTCATTTAATATACCAAATCCATTTTCAATTTGGTACTTCAATGGAAGAGTTGTATACGGCGACATAATCGAAGCTACCAACAACTTCGACGAAAAATATTGTGTTGGCGAAGGAGCATTCGGGAATGTTTACAAAGCCGAATTAAAAGGAGGTCAAATATTCGCGGTGAAAAAGCTGAAATGCGACGAAGAGAATTTAGACATGGAGAGTATAAAAACATTTGAAAAAGAAGTAGAAGCTATGACAGAAACAAGGCACAGAAACATTGTGAAGCTTTATGGATTTTGTTGCGAAGGGATGCATACATTTCTTGTTTATGAGTATATGGATAAAGGGAGTTTGGCAGATATGTTGATGAATGATAAGAAAGCATTGGAACTTGATTGGTTTAAAAGGGTTAATATTGTTAAAGGTGTTGCAAGTGCTCTCTCTTATATGCATCATGATTGTTCACCACTTCTGATTCATAGAGACATATCAAGCAAGAATGTTTTGCTATCTTCAAATCATGAAGCTCATGTATCCGATTTCGGTACCGCAAGGTTTCTTAAGCCAAATTCGCCTATTTGGACTTCATTTGCTGGTACATATGGTTATGCTGCTCCAGAGCTTGCATATACAATGGCAGTGACAGAGAAATGTGATGTATTTAGCTTTGGTGTTTTAGCATTTGAGATTCTAACAGGAAAACACCCTGGTGATCTTGTTTCTTACATACAAACATCGAATGATCGAAAGATGGATTTCAAAGAGATGTTAGATCCGCGTCTACCTTCTCCTCCGAAGAATGTTTTGAAGGAGTTGGTTTTGGTTGGAAACATGGCTCTTTCTTGTTTACAGACAAATCCTCAATCTAGACCTACCATGAGAAGCATTGCCCAAATGCTAGAAATGGAGACTACATATAACTCTTGA 2847 0.366 MSNKNHNHTFPISATLLIFLLLNLCQETSGLTQYEALLKWKQSLPQQPILDSWIINNSTSTQSPCSWRGITCDSKGTVTILNLAYTGLQGTLNHLNLSVFPNLLRLDLKTNNLTGIIPGNIGVLSKLQFLDLSTNYFNGTLPLSISNLTQVYELDVSRNDVSGILDSRLFPDKPSSKIGLIGIRNLLFQDTLLGGPLPNEIGNLKNLTLLALDANNFSGPIPSSLGNCKHLSILRLNENYFTGPIPPSLGKLTNLTDLRFFINELNGTVPQEFGNLSSLVVLHLAQNNFIGELPPQVCKSGKLVNFSAAYNSFTGPIPRSLRNCPSLYRVRLEYNELTGYADQDFGVYPNLTYMDFSYNKVEGDLSSKWGSCKNLQLLKMAGNSVDGNIPSEIFELKQLHELDLSFNKLSGTIPSQIGNSSNLYTLNLGGNRLSGKLPIEIGRLSNLQHLDLSMNMLLGEIPSQIGDSSNLLNLNLSNNHLNGTIPFQIGKLASLQDFLDLSYNSISGEIPSNIGMLSNLISLNISNNNLSGSIPDEIGGMLSLSNLNLSYNNLEGHVPKGGIFKVNSSHALDLSNNQGLCGKFQGLKPCNVSLIEPSDGSKKKKVWIPIVASLGGALFLSLVFVGIFFLCNKKNSRTSRQKKLSFNIPNPFSIWYFNGRVVYGDIIEATNNFDEKYCVGEGAFGNVYKAELKGGQIFAVKKLKCDEENLDMESIKTFEKEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDKGSLADMLMNDKKALELDWFKRVNIVKGVASALSYMHHDCSPLLIHRDISSKNVLLSSNHEAHVSDFGTARFLKPNSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDRKMDFKEMLDPRLPSPPKNVLKELVLVGNMALSCLQTNPQSRPTMRSIAQMLEMETTYNS* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4379 948 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 2 944 - -
Psa7g4379 948 SMART serkin_6 673 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4379 948 ProSitePatterns Protein kinases ATP-binding region signature. 679 702 IPR017441 GO:0005524
Psa7g4379 948 Pfam Protein kinase domain 676 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4379 948 Gene3D Ribonuclease Inhibitor 265 593 IPR032675 -
Psa7g4379 948 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 944 - -
Psa7g4379 948 PRINTS Leucine-rich repeat signature 399 412 - -
Psa7g4379 948 PRINTS Leucine-rich repeat signature 444 457 - -
Psa7g4379 948 Gene3D Transferase(Phosphotransferase) domain 1 753 947 - -
Psa7g4379 948 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Psa7g4379 948 ProSitePatterns Tyrosine protein kinases specific active-site signature. 798 810 IPR008266 GO:0004672|GO:0006468
Psa7g4379 948 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
Psa7g4379 948 SMART LRR_typ_2 396 420 IPR003591 -
Psa7g4379 948 SMART LRR_typ_2 517 541 IPR003591 -
Psa7g4379 948 SMART LRR_typ_2 204 228 IPR003591 -
Psa7g4379 948 SMART LRR_typ_2 124 148 IPR003591 -
Psa7g4379 948 SMART LRR_typ_2 276 300 IPR003591 -
Psa7g4379 948 SMART LRR_typ_2 444 468 IPR003591 -
Psa7g4379 948 SUPERFAMILY RNI-like 75 294 - -
Psa7g4379 948 Gene3D Ribonuclease Inhibitor 173 264 IPR032675 -
Psa7g4379 948 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Psa7g4379 948 Gene3D Phosphorylase Kinase; domain 1 633 752 - -
Psa7g4379 948 SUPERFAMILY RNI-like 240 581 - -
Psa7g4379 948 SUPERFAMILY Protein kinase-like (PK-like) 649 942 IPR011009 -
Psa7g4379 948 ProSiteProfiles Protein kinase domain profile. 673 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4379 Psa-Chr7 359527959 359531477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4379 15 846 Receptor kinase-like Gene Family AT4G08850 40.215 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g4379 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4379 - - aprc:113866080 1436.78