Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4363 ATGGCGACGGGGAACACCGTAACATCAAACCCTAGCCATGGAGAACGACCAAAAGTGGTGGTTATAACCGGCCCAACCGGTTCTGGAAAGTCAAAGCTAGCCGTTGATCTGGCCTCCCACTTCCCCCTCGAAGTAATCAACGCCGATTCCATGCAAGTCTACACTGGCCTCGACATTCTCACCAACAAGCTCCCCTTCTCCGAACAAAACGAAGTACCGCACCATCTTTTGGGCACTGTTAACCCAAACATTGAATTCACCGCCAAAGCTTTTCGGGATTCTGCTATTCCCATCATTGATGCCATATTGTCTCGTAATCACTTACCCGTTATAGTTGGCGGTACTAATTATTATATACAGGCACTTGTGAGTTTGTTTCTGTTAGATGATTCAACCGATGATTTGAATCAAAGCGATTTGGGTGACTCACCTGGTATCACAGGGTGTGATAATGGTATTGTTGCTGAAAACGACGGTTCTAGCAACAGTTATGATTTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCATCCAAATAACCATAGAAAGATAAACCAATACATAAGTTTGTACTCTCGTACTGGTGTTCTTCCCAGCAAAGTCTTTCAAGGACAGGCAGCAGAGAATTGGGGACAAGCTGATAACTTAAGATATGATTGTTGTTTTATAAGTGTAGACGCATCTCTCCCGGTATTGGACAGATATGTGGAGCAGAGGGTAGATCACATGATGGATGCGGGATTACTCAATGAAGTCTATGACATTTACTCTATGAATGCAGATTATACCAGAGGTTTGCGACAAGCCATTGGTGTCCGTGAATTTGAGCATCTTCTTCAAACCTGTGTTTTCAAAAACATAAATCAGAAAAAGGAGTTAACTGATGGAGCGAGCTTAGGAAATTGCGAGCCAGTGCTTGGTGGAAATTTAATGGAGTGGTTTAGATCTTCCTCTGATACTAAGTCCATAAATCTTTTAGAAGAAGCAATTGAGAAAGTAAAGGTTAATACCAGGAGACTTGTTCGCCGTCAGAAGAGGATGCTCAGTCGACTTCAAACATTGTTTGGTTGGGAGATACACTGTGTTGATTCCACGGAATCAATATCTAGCAGATCAAATGATGTATGGAATAGCCAAGTGGTTGAAACTGCCATGAAGATAGTGACATCTTTCTTAAGTGAGAATGGTAACTTGTCGGCGTCAAATGGCAATGGGATGAAAACAATCCAAAGGGACCTCTGGACTCAATACACATGCAAGGCCTGCTGTGATCGTGTTCTTCGAGGAATACATGAATGGGAAGAACATATTCGTGGACGTGGGCATCGCAAACGTATTTCTAGTCTCAAGAGCAAGGCAAAGTATCTTAGTTTTGTGGCGCAGAAGCGTGAGCCAACCGAGCCAACCGAGCGCTAA 1422 0.4318 MATGNTVTSNPSHGERPKVVVITGPTGSGKSKLAVDLASHFPLEVINADSMQVYTGLDILTNKLPFSEQNEVPHHLLGTVNPNIEFTAKAFRDSAIPIIDAILSRNHLPVIVGGTNYYIQALVSLFLLDDSTDDLNQSDLGDSPGITGCDNGIVAENDGSSNSYDLLKDIDPVAANRIHPNNHRKINQYISLYSRTGVLPSKVFQGQAAENWGQADNLRYDCCFISVDASLPVLDRYVEQRVDHMMDAGLLNEVYDIYSMNADYTRGLRQAIGVREFEHLLQTCVFKNINQKKELTDGASLGNCEPVLGGNLMEWFRSSSDTKSINLLEEAIEKVKVNTRRLVRRQKRMLSRLQTLFGWEIHCVDSTESISSRSNDVWNSQVVETAMKIVTSFLSENGNLSASNGNGMKTIQRDLWTQYTCKACCDRVLRGIHEWEEHIRGRGHRKRISSLKSKAKYLSFVAQKREPTEPTER* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4363 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 16 397 IPR039657 -
Psa7g4363 473 TIGRFAM miaA: tRNA dimethylallyltransferase 19 285 IPR018022 GO:0008033
Psa7g4363 473 Gene3D - 153 208 - -
Psa7g4363 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 260 IPR027417 -
Psa7g4363 473 Coils Coil 325 345 - -
Psa7g4363 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 16 397 - -
Psa7g4363 473 Hamap tRNA dimethylallyltransferase [miaA]. 19 375 IPR018022 GO:0008033
Psa7g4363 473 Gene3D - 17 416 IPR027417 -
Psa7g4363 473 Gene3D Classic Zinc Finger 417 460 - -
Psa7g4363 473 Pfam IPP transferase 52 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4363 Psa-Chr7 358062406 358066516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4363 22 466 C2H2 Transcription Factor Family AT2G27760 56.167 4.27e-169 483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4363 7 358062406 358066516 Psa7g4363 7 358062406 358066516 ECH