Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4362 ATGAGCGGCCGGAAATGGGACCGGAGAGACAACAGAACTTCAAAGAAGCAGAAATTGGTCAACAACGCCGAGGAAGAACTTGAAGCAAAGCTAGGGTTCGACCTTTTCTCAGAAGGGGAAAAACGACTTGGATGGTTACTCACCTTTTCAACATCATCTTATGAAGATGAGGATACCCGCAAAGCCTACAGTTGCGTTGATCTTTACTTTGTCACACAGGATGGGTCTTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTATGTAGCTACAAAGAATAAAATGGAGATGGATGTTGATGCATACCTGAGACGACGTTATGAAGGCCAGATTGCAGATATCAAAATTGTAGAAAAGGAAGATCTGGATCTTAAAAACCATTTGTCTGGATTAAGAAAATCTTATTTAAAGATTTCATTTGATACTGTACAACAACTGATGAATGTGAAGAGTGACCTGATGCATGTTGTTGAAAGAAATAAAGCAAAGTCTGATGCTGCAGAAGCCTATGAGTCCATATTATCAGGGAGAAGAGAACAAAAACTTCAAGATTTTCTAGATTGCATAATTGATCTCCGTGAATATGACGTTCCTTACCATGTTCGCTTTGCTATTGACAACGATATACGGTGTGGCCTGTGGTATGATGTTGGTGTGTCCACTGATGGGGTTACACTTGAGAGAAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTGTTTGTGCATTTGATATCGAGACTACAAAACTTCCATTGAAGTTTCCTGATGCTGACTATGATTCAGTTATGATGATTTCATATATGGTAGACAGGCAAGGGTATTTAATCATAAATAGAGAGTGTGTTGGGGATGATATAGAGGATTTAGAGTTCACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGATTGAGCTTCTTAGAACATGGTTTTCTCATATGCAAGAAGTGAAACCTGGTATCTATGTGACATATAACGGTGATTTCTTTGACTGGCCATTCCTGGAACGACGGGCAGCCCATCACGGGTTCAAAATGAGTGATGAACTGGGGTTTCAATGTGACATGAATCAAGGGGAATGTCGTGCTAAATTTGCTCCCCATTTAGATTGCTTTGCATGGGTTAAACGTGACAGTTATCTTCCTCAGGGGAGCCAAGGCCTCAAGGCTGTAACAAAAGCCAAGTTGGGGTATGATCCAGAGGAGGTGAACCCAGAGGACATGGTACGCTTTGCAAAGGAAAAGCCTCAGATGATGGCCTCCTATTCTGTTTCTGATGCAGTGTCAACATATTACCTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCCACTATCATTCCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGCGGGACCCTATGTGAAATGTTGCTTATGGTCCAGTCATACGAGGCTAATGTTATCTGCCCTAACAAGCACCAATCTGATCCGGAGAAGTTTTACAAGAATCATCTTCTTGAGAGTGAGACGTATATAGGTGGCCATGTTGAATGCCTAGAAAGTGGTGTATTTAGATCGGATATTCCATGTAATTTTACACTCGAGCCATCTGCCTTTGAGCAATTGATCAACAACCTTGATCGAGATCTACAATATGCTATAAGAGTAGAGGGTAAGATGGATTTAGAATCTGTCTCAAATTATGATGAAGTGAAGGATGCTATCCTGGAAAAGCTTGTAAAATTACGAGATGCACCAATACGTGATGAATGCCCCCTCATTTATCATTTGGATGTAGCTGCAATGTATCCAAACATAATTTTAACAAACCGACTTCAGCCTCCATCAATTGTTACGGACGAGATTTGCACTGCATGTGACTTTAACCGTCCCGGAAAGACTTGTCTACGCAAGCTTGAATGGGTTTGGCGTGGAGAAACATTCACGGCAAAGAAAAGTGACTATTATCATCTAAAGAAGCAAATTGAGTCAGAGTTTGTAGATGGAGTAAATGAAAGGTCAACAAAATCGTTTCTTGACCTGCCCAAAGCTGAGCAACAACTAAGACTAAAAGAGCGTTTAAAGAAATACTGCCAAAAGGCATATAAACGAGTACTTGACAAACCAGTTACTGAACTCCGTGAAGCTGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGGAGATATGAATATAAAGGCCTTAACAAGGTTTGGAAAGGAAAACTATCAGACGCCAAGGCCAGTGGAAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATTCTTAATTCCTTTTATGGATACGTAATGCGAAAGGGTGCAAGATGGTACTCCATGGAAATGGCCGGTGTTGTCACATATACTGGTGCTAAAATAATTCAGAATGCCCGCTTACTGGTAGAGAAAATAGGGAAACCACTTGAACTAGACACTGATGGTATCTGGTGTGCACTTCCTGGGTCGTTTCCAGAAAATTTCACTTTCAAAACAATAGACTCAAAAAGGAAGCTGACAATCTCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAATACAAACGATCAGTACCAGACGCTCACAGATCCAAATAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATATAAGGCAATGATCATACCTGCTTCCAAGGAGGAAGGAATTTTAATTAAGAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAGGTTTTCCAGGCCGAGCTTTTTGACAATTTTCTGCACGGCTCAACCTTAAAGGAATGCTATTCAGAAGTTGCTATAGTGGCAAATCGCTGGCTTGATCTTCTTGATACCCAAGGAAAAGATATTGCAGATAGCGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGAATATGGTCAGCAGAAGTCTTGTGCTGTTACCACTGCTAAACGTCTTGCTGATTTTCTTGGTGATGCAATGGTCAAAGATAAAGGTCTTCGATGTCAATACATAGTAGCAAGTGAACCTAAGGGAACACCTGTGAGTGAACGTGCTCTTCCTGTGGCAATATTTCAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGGCATTCGCTCTATAATTGACTGGTCCTATTACAAGCAGCGGCTTAGTTCTGCAATTCAAAAAATTATCACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCTAGGGTTGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAAAGAAAAATAGACGATACCTTTAAGTCAATGATAAAAAACGAGAGCTCAAAAAAACATAATGATTCTAAAGGTGTCCACGACATTATGATTGATGAGAGTGTTGATGACTTGGAGGACTTCGGAAACAAGGGCAGGAGTTCTACAGGACCTAGACCAATTATACGGCATTATGAAGCTAACAATGAACAGCATTCAGATAAGTTCAATGGTCAAGAAGATTCAGAGCAACAACCTATTGACAGGAGTAACATAGTTCACCCACTTTCACAACAAAATGAAATATTATGTGAAGATATCGACAGAACTGTAGATTATCAAGGATGGCTTCAAATGAAAAAGAGAAAGTGGAAAAATATGTTGGGAATGAGAAAAAAGCAAAGATTGGAGATTTCAAAGAGATCTGACAATTTAAATGGCAGTATTGAACAAACCAGCGGTAAGTTGAATCACGGCAAAAGTAATGTCAGTTCATATTTTAGAAGGCACGAGGAAGCCTTAACACGGTGCCACTGGCAGATAATACAGCTGGTCTACAGTACACAAGCTGGCCAGTTTTTTGCTTGGGTTGTTGTTGACGGGATTATGCTCAAGATTCCTATTTTTGTTCCTAGAGTCTTTTACCTTAACTCTAGATTACCAACTGAAGAATTTTCTGGCAAACGTGTCAACAAGACTCTTCCTCATGGAAGACATAGCTATAACCTGTATGAGGTCACAATTAATGAAGTACAATATAAAGAAGAAAGCAAAAAACTTGCCGCTCTTCTAGCAGATCCTGATGTTGAGCATTCTCACTCTAACTAA 4245 0.4016 MSGRKWDRRDNRTSKKQKLVNNAEEELEAKLGFDLFSEGEKRLGWLLTFSTSSYEDEDTRKAYSCVDLYFVTQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYEGQIADIKIVEKEDLDLKNHLSGLRKSYLKISFDTVQQLMNVKSDLMHVVERNKAKSDAAEAYESILSGRREQKLQDFLDCIIDLREYDVPYHVRFAIDNDIRCGLWYDVGVSTDGVTLERRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDSVMMISYMVDRQGYLIINRECVGDDIEDLEFTPKPEFEGCFKVTNVQNEIELLRTWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAHHGFKMSDELGFQCDMNQGECRAKFAPHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPEEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQSYEANVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDIPCNFTLEPSAFEQLINNLDRDLQYAIRVEGKMDLESVSNYDEVKDAILEKLVKLRDAPIRDECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGETFTAKKSDYYHLKKQIESEFVDGVNERSTKSFLDLPKAEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSDAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTIDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPNRKTYTTHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDNFLHGSTLKECYSEVAIVANRWLDLLDTQGKDIADSELLDYISESSTMSKSLAEYGQQKSCAVTTAKRLADFLGDAMVKDKGLRCQYIVASEPKGTPVSERALPVAIFQTDAEVMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKIDDTFKSMIKNESSKKHNDSKGVHDIMIDESVDDLEDFGNKGRSSTGPRPIIRHYEANNEQHSDKFNGQEDSEQQPIDRSNIVHPLSQQNEILCEDIDRTVDYQGWLQMKKRKWKNMLGMRKKQRLEISKRSDNLNGSIEQTSGKLNHGKSNVSSYFRRHEEALTRCHWQIIQLVYSTQAGQFFAWVVVDGIMLKIPIFVPRVFYLNSRLPTEEFSGKRVNKTLPHGRHSYNLYEVTINEVQYKEESKKLAALLADPDVEHSHSN* 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4362 1414 Pfam DNA polymerase family B 754 1068 IPR006134 GO:0000166|GO:0003677
Psa7g4362 1414 Gene3D DNA Polymerase, chain B, domain 1 49 223 - -
Psa7g4362 1414 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 30 1410 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Psa7g4362 1414 SUPERFAMILY Ribonuclease H-like 56 465 IPR012337 -
Psa7g4362 1414 CDD DNA_polB_epsilon_exo 238 441 - -
Psa7g4362 1414 Pfam DNA polymerase family B, exonuclease domain 72 398 IPR006133 -
Psa7g4362 1414 Gene3D Palm domain of DNA polymerase 753 935 IPR023211 -
Psa7g4362 1414 CDD POLBc_epsilon 501 1120 - -
Psa7g4362 1414 Gene3D - 236 466 IPR036397 GO:0003676
Psa7g4362 1414 Gene3D - 939 1123 IPR042087 -
Psa7g4362 1414 SMART polmehr3 237 840 IPR006172 GO:0000166|GO:0003676|GO:0003887
Psa7g4362 1414 SUPERFAMILY DNA/RNA polymerases 484 1113 IPR043502 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4362 1 1409 Core DNA Replication Machinery Family AT1G08260 78.114 0.0 2278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4362 K02324 - gmx:100812003 2441.38