Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4323 ATGGCTAGTCATAGAATTGGAGAGATTGGTTTATCTGAGTCAGGACCTTCAAGTCAACATGTCCCTTATGGTGTTCTTCATGGAATCACTACCTCAACATCAACCTTAATGAATCAAGGATCTGCTTTTGATTTTGGAGAGCTTGAAGAGGCAATTGTTCTTCAAGGAATCAAGATAAGAAATGATGAAGGAAGCAAACCAGCAGCTACACTTGAAATGTTTCCTTCATGGCCAATTAGGTTCCAACAAACACCAAGAGTTGTTGCTTCTCTCACTTCACCATCTTTGACAAATCCATATGGTGTTTCAAAATCAGGAGGTGAAAGTAGTGATTCAGGCTCAACAGAAGTTCAGTTTGAAACAGATTCACCAATAAGTATAAAAGCATCTTCTTCTTCAGATCATCATCATAATCATGGTTTTGATCAGATTCAGCAGCAGCAGCAACAGGAGATAGCAACAACTGATGATGCTTTAAGAACAGGCACATCACAGAATCAATCAAAAGCCAAACCACTTCAACAAAAGAAAAAAGGAGCTGTTTCAGCATCAGAAAAAACACTTGATCCAAAGACACTGAGAAGATTGGCACAAAATAGAGAAGCTGCAAAGAAAAGCCGCTTAAGAAAAAAAGCTTATGTGCAGCAGCTAGAGTCCAGTAGATTAAGATTATCGAATCTTGAACAAGATCTTCAAAGAGCACGATCTCAGGGACTATTTTTAGGTTGTGGTGGTGGAGGAAATATAAGCCCTGGAGCTGCGATGTTTGACATGGAGTATGCAAGATGGTTAGAGGAAGATCAACGGCTCTTGACCGAGCTTCGTGGCGGGTTGCATGCGGCATTGGTGGATAATGAGCTGAGAGTGATCGTCGACGGATATCTTTATCATTACGACGAGCTTTTCCGATTAAAAGAAGTGGCGGTTAAGTCAGATGTTTTTCATCTTATTAAAGGTATTTGGACTTCTCCGGCCGAGCGACCCTTCATTTGGATAGGTGGTTTCAAGCCCTCGGAGCTCATCACGATGTTGACACAACAATTGGAGCCTCTAGCTGAGCAACAAATAGTAGGGATAATGGAGCTAAGACATTCATCACATCAAGCAGAAGATGCTCTCTCTCAAGGCCATGAGCAGCTCCACCACTGTATTGTTGACACCATCGCGGGAGGGCCGGTCATCGACGGTGTTCAACAGATGGTCGCCGCCATGGCCAGAATATCCAACCTTGAAGGCTTTGTCCATCAGGCTGACAATTTGAGACAACAAACTCTTCATCAATTATGTCGTATATTGACGGTTCGTCAAGCAGCGAGATGTTTTATTGTGATTGGAGAATATTACGGACGTCTTCGAGCTCTTAGTTCTCTTTGGGCTTCAAGACCACGAGAGAACTTGATGAACGATGATAATTCATGCCAAGCAACAACGGAATTGCAAATGGTTCAATCTTCTCAAACTCATTTCTCGAGTTTTTGA 1479 0.4233 MASHRIGEIGLSESGPSSQHVPYGVLHGITTSTSTLMNQGSAFDFGELEEAIVLQGIKIRNDEGSKPAATLEMFPSWPIRFQQTPRVVASLTSPSLTNPYGVSKSGGESSDSGSTEVQFETDSPISIKASSSSDHHHNHGFDQIQQQQQQEIATTDDALRTGTSQNQSKAKPLQQKKKGAVSASEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLRLSNLEQDLQRARSQGLFLGCGGGGNISPGAAMFDMEYARWLEEDQRLLTELRGGLHAALVDNELRVIVDGYLYHYDELFRLKEVAVKSDVFHLIKGIWTSPAERPFIWIGGFKPSELITMLTQQLEPLAEQQIVGIMELRHSSHQAEDALSQGHEQLHHCIVDTIAGGPVIDGVQQMVAAMARISNLEGFVHQADNLRQQTLHQLCRILTVRQAARCFIVIGEYYGRLRALSSLWASRPRENLMNDDNSCQATTELQMVQSSQTHFSSF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4323 492 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700|GO:0006355
Psa7g4323 492 PANTHER TRANSCRIPTION FACTOR TGA9 59 471 - -
Psa7g4323 492 PANTHER TRANSCRIPTION FACTOR TGA9 59 471 - -
Psa7g4323 492 Pfam Seed dormancy control 271 345 IPR025422 GO:0006351|GO:0043565
Psa7g4323 492 Pfam bZIP transcription factor 191 232 IPR004827 GO:0003700|GO:0006355
Psa7g4323 492 Coils Coil 210 237 - -
Psa7g4323 492 SMART brlzneu 187 262 IPR004827 GO:0003700|GO:0006355
Psa7g4323 492 SUPERFAMILY Leucine zipper domain 191 233 IPR046347 GO:0003700|GO:0006355
Psa7g4323 492 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Psa7g4323 492 MobiDBLite consensus disorder prediction 99 192 - -
Psa7g4323 492 MobiDBLite consensus disorder prediction 142 173 - -
Psa7g4323 492 Gene3D - 190 239 - -
Psa7g4323 492 ProSiteProfiles DOG1 domain profile. 253 461 IPR025422 GO:0006351|GO:0043565
Psa7g4323 492 MobiDBLite consensus disorder prediction 99 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4323 Psa-Chr7 351711025 351715988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4323 163 492 bZIP Transcription Factor Family AT1G08320 68.373 6.86e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g4323 DOG1 5.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4323 K14431 - gmx:100775461 650.203