Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4315 ATGGCAGAGGCGGAGGAGCTTCCCAAAAGTATCGTACGCCGCGTGGTGAAGGAAAAGCTATCCACTTGCTCCGACGACGGAGACATTTCCGTTCACAAAGACGCTCTTCTGGCATTCTCCGAAAGTGCCAAAATTTTCATCCACTACCTTTCCGCTACGGCTAATGATATATGTAAGGAGTCAAAGAGGCAAATTATCAATGCTGAAGATGTTTTCAAAGCTCTTGAAGAAACTGAGTTTACTGAATTTGTTAGCCCTCTGAAAGATTCTCTTGAAGAGTTTAGGAAGAAGAATGCTGGGAAGAAAGTGACGGTGTCAAAGGGAAAGGGGGATGAGAAGGGAAAGAAAAGAAAGTTGGAAGGTGAGCTGTCTGATAAAGGTGAGCCATTTGAAAAAGGGGATCTGGGTGAGCCATCTGATAAAGGCGATCAGGGTGAACCATCTGATAAAGGTGATGATGACCAATGA 468 0.4466 MAEAEELPKSIVRRVVKEKLSTCSDDGDISVHKDALLAFSESAKIFIHYLSATANDICKESKRQIINAEDVFKALEETEFTEFVSPLKDSLEEFRKKNAGKKVTVSKGKGDEKGKKRKLEGELSDKGEPFEKGDLGEPSDKGDQGEPSDKGDDDQ* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4315 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Psa7g4315 155 Gene3D Histone, subunit A 1 144 IPR009072 GO:0046982
Psa7g4315 155 MobiDBLite consensus disorder prediction 100 148 - -
Psa7g4315 155 Coils Coil 58 78 - -
Psa7g4315 155 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 146 - -
Psa7g4315 155 SUPERFAMILY Histone-fold 7 136 IPR009072 GO:0046982
Psa7g4315 155 MobiDBLite consensus disorder prediction 100 155 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4315 7 111 CCAAT-HAP3 Transcription Factor Family AT4G14540 31.429 3.05e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Psa7g4315 CBFD_NFYB_HMF 4e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4315 K02326 - gmx:100306382 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4315 7 351073459 351075573 Psa7g4315 7 351073459 351075573 ECH