Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4292 ATGTCTTCCAACAAGAAAAACATCATGCGAACAATTTTCACAACAAACGGAAGCTGTGGATCATGCGTAAAACCAAAAGCCATTCAAGTCCATGAACCAACCCTAAAACCCAAACTTCCCATCAACCATAATAACAAGATCACAAACTCTAGTAAGGCTTCTTCTACTACAACTTCAGGCGACCGAAACGGCGCCGTTTGTAGCGTCGACGACAGCGATGATTTCTCCACCACCACGTTCTCGGAAGCAGATACAATAAACAACTACTCCGCACCCAAACAGAGTCCGTTAATGAACACCGTCGCGGTCGAGAAGGACTCCGAAGATCCGTATCATGATTTCAAACATTCCATGCTTCAAATGATCTTCGAGAATGAGATCGATTCCGAAGACGATCTTCAAGATCTTCTCCGGTGTTTTCTTCATCTGAATGAATCATGTTATCATCGTGTGATCGTTAAAGTCTTCAATGAAATCTGTCATGAAGCTTTTCCTGATAAGTGTGAGGGGCGAAAAAATCCATTTGACCCTGGGGCGAGGGTGAATGGTAAATTGTTATCCCGACTGAATTTGAGGACGGTGTAG 585 0.4359 MSSNKKNIMRTIFTTNGSCGSCVKPKAIQVHEPTLKPKLPINHNNKITNSSKASSTTTSGDRNGAVCSVDDSDDFSTTTFSEADTINNYSAPKQSPLMNTVAVEKDSEDPYHDFKHSMLQMIFENEIDSEDDLQDLLRCFLHLNESCYHRVIVKVFNEICHEAFPDKCEGRKNPFDPGARVNGKLLSRLNLRTV* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4292 194 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
Psa7g4292 194 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Psa7g4292 194 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Psa7g4292 194 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 172 IPR038933 GO:0045892
Psa7g4292 194 MobiDBLite consensus disorder prediction 41 63 - -
Psa7g4292 194 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 172 - -
Psa7g4292 194 MobiDBLite consensus disorder prediction 38 63 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa7g4292 Ovate 5.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4292 - - mtr:MTR_4g052040 248.825