Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4273 ATGGAATCTAAGATGGATCAGTATGAGATCATGGAACAGATCGGTCGTGGAGCTTTTGGTGCTGCTATTCTTGTTAATCACAAGGCTGAGAAAAAGAAATATGTGTTGAAAAAAATCAGGCTTGCTAGACAGACTGAACGGTGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCAAGAATCAAGCACCCTTACATTGTAGAATTCAAAGAGGCTTGGGTTGAGAAATGGCCATACTGTGAAGGTGGAGACATGGCTGAACTAATGAAAAAGTTAAATGGTGGTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTTTTGGCGGTGGAATACCTTCATTCAAATTATGTTTTGCATCGCGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCATGATATCCGCCTCGGAGATTTCGGGCTTGCGAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCGAATTACATGTGTCCTGAACTTCTCGCAGATATTCCGTATGGATTCAAATCTGATATTTGGTCATTAGGTATGTTGCTGGGTGTACTACGAGATGGCCGCTCATCGCAGCCTTTAAAGCTTTTGAAAATACTAATAAAAGGCATGTTGAGAAAAAGCCCCGAGCATCGACCAACGGCATCTGAGGTGTTGAAGCATCCTTATTTGCAACCTTACGTCGATCAATATCGTCCGTCTTTCGCTCCTCAAACAGCCTTTTCTCCTGAAAAACCGCTTTCTTCTGTCAACGATACCAAAAAACATATGGCTGAAAGTCAGAACAGTACCGGTTCAAGTAGTGACAAAGATAGTTTAATGTCAATTGAGAGAAACATTGCAACGGAAACGACAACAACGCTAAAGAGTGATAGCAAAGCCACTGAGATAGATGTTGCATTAATCAATGATGATGGCTCGGAGCAAGAGGCGATAAAATCTTCTCATAATGAACAATGTTCTAATGTTGAATCTAAACAGCCAAAAACAATCAGAAATATAATGATGGCATTGAAGGAAGGGAGAGGTAGAGATGCAACTTCTCCAATGAGGGGAAGTCGTGTAAAGGCCGTTGGAGTATCGACGCAGAAAGTAAATACAGAAGTATTGTCTAAGTTGCCTAAACCTACTTTCATTTCTCCTGGTTTGAAGCCTAATTTAGAGTCACCGGCTGTTCCACTTGTAAAGGCAACCCTTGATTCCGCAAAGCGAATACAAGGATCATATCATTCAAAGCTCCAGTTACTAATGACAGAGCCATCACCTAAAGTTAAATCAAAACATGATATGACTCCACTATCTGGTTTGATAAAACAACTAGAAGGAGATGGAGTTCCTCCTAGGCCAAGGCAAAGAACTCCCCCGAGCTTACTTCGACGACCTTCTTTTGCAGGACGAATGAAGCTGGCAGGGGTTGATGTTCCAAATGCAGCGAATGATAGCGGGAAGCTAGGTCCAAGTAATTCAGGCCAGGAATCTCAGATGAGCCACTGTCAGATGTTTAACGGTGTTCCACGTATTTCTAGACAGATTACTAGAGAACCTCATAAGGCTTTTGAAAGAAGTTCTAAAGGATTGCAAACAGACAGTAGTAATTCTGCCTCGTCTTCGGTTTCGATTCAAGGATGTGAACTTGCTGACGATGCAACAACTTTTATTGACATGCGAGAACATATACTTCCCAATCATGACAATATAACAAACATTATAGGTGTGGAATCACGTCCAGACAGCAGCCAGTCGACAACATGTTCGCATTGTAAGATGGCTGAAGAAATGTCCGAGGATTCCAATGAAGTAACCCTGAGTTTTAAGAATACTATTAGTAGTGATGAAAAAGTGAGTTCCAATTTAACTCTTGATGATCTCCCAGTTGAGAATTCTAAGAAAATGTTTGGTTCGGAAGATAGTCTTCCGAAAAATCAGACAACTAGATCTGTTGACGCATCTACTGAAGCGGTAGAAGAAATCAAAGATCTTCGAGATATTTCTAAGGAAATGGCTTTAACCAAGTCTCTCAAAAATCCACCCTCAATCTCTGGAGAAAAATCTGTTTGTGAAGAATTTGGTTCGGTAAACAATCTCAATAATAGACCTGAAACTGTCACTGGTGATGAAAAATTCACGGTGAAGGATCGACTGTCATTGGTCACTGAAACAGCTCCTGTAATTACTGCTACTAAAATATCTAGCCAAGAACGGCCAGATACTAGTCATCTTCCTGCAGCCTTTGACGATATCATCCATGTTATTCGCCATAGTAGTTACCGTGTTGGGAGTGATCAACCGGTAAAAGAATCGGTGGAAATGGGAGTTCAGAATGTCGACGTTGGCAAGTTTATCAATGCTATGAGAGACGACATAGAAATGAGAAACATAAGCTCTCCTATGACTCTTAAATCTTCAACTTCCTCTGAATCCGCTACCTTGAAATCAAATATTTCCGACCAGTTCGAAATGAGAAATGCGAGCACAAGTTTCTCCGACGCCGAGAGCTTGAAATCGAGTGTCTCCGATCATCCTAGCCTAAAGGAACAAGAAGTGAACAACACTGTTTCTTTAGTTTCAGAATCCGATTCAGCTGAGCATAGTAAATGCAACACTCCTACAACCACCGAAGACAAACCACCACTGGCAAAGGAAATACTCGACGTGAAATCTTTTCAGCAGAGAGCAGAAGCACTCGAAGAGCTCTTGGAATTGTCTGCAGACTTGTTGCAGCAGAACAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCATTTGGCAAAGATAAGGTCTCGCCGAGGGAGACAGCAATTTGGTTAGCCAGGAGTCTGAAGGGAATGATGTCGGACGAAAACGGAAGACGCGGTTCATCATAA 2886 0.4175 MESKMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIKHPYIVEFKEAWVEKWPYCEGGDMAELMKKLNGGYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDHDIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGMLLGVLRDGRSSQPLKLLKILIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFAPQTAFSPEKPLSSVNDTKKHMAESQNSTGSSSDKDSLMSIERNIATETTTTLKSDSKATEIDVALINDDGSEQEAIKSSHNEQCSNVESKQPKTIRNIMMALKEGRGRDATSPMRGSRVKAVGVSTQKVNTEVLSKLPKPTFISPGLKPNLESPAVPLVKATLDSAKRIQGSYHSKLQLLMTEPSPKVKSKHDMTPLSGLIKQLEGDGVPPRPRQRTPPSLLRRPSFAGRMKLAGVDVPNAANDSGKLGPSNSGQESQMSHCQMFNGVPRISRQITREPHKAFERSSKGLQTDSSNSASSSVSIQGCELADDATTFIDMREHILPNHDNITNIIGVESRPDSSQSTTCSHCKMAEEMSEDSNEVTLSFKNTISSDEKVSSNLTLDDLPVENSKKMFGSEDSLPKNQTTRSVDASTEAVEEIKDLRDISKEMALTKSLKNPPSISGEKSVCEEFGSVNNLNNRPETVTGDEKFTVKDRLSLVTETAPVITATKISSQERPDTSHLPAAFDDIIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINAMRDDIEMRNISSPMTLKSSTSSESATLKSNISDQFEMRNASTSFSDAESLKSSVSDHPSLKEQEVNNTVSLVSESDSAEHSKCNTPTTTEDKPPLAKEILDVKSFQQRAEALEELLELSADLLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSDENGRRGSS* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4273 961 Coils Coil 886 906 - -
Psa7g4273 961 MobiDBLite consensus disorder prediction 523 546 - -
Psa7g4273 961 Gene3D Transferase(Phosphotransferase) domain 1 83 308 - -
Psa7g4273 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 204 943 - -
Psa7g4273 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 188 - -
Psa7g4273 961 SUPERFAMILY Protein kinase-like (PK-like) 4 253 IPR011009 -
Psa7g4273 961 MobiDBLite consensus disorder prediction 483 503 - -
Psa7g4273 961 MobiDBLite consensus disorder prediction 834 882 - -
Psa7g4273 961 MobiDBLite consensus disorder prediction 532 546 - -
Psa7g4273 961 Pfam Protein kinase domain 8 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4273 961 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Psa7g4273 961 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Psa7g4273 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Psa7g4273 961 SMART serkin_6 8 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4273 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 204 943 - -
Psa7g4273 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 188 - -
Psa7g4273 961 ProSiteProfiles Protein kinase domain profile. 8 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4273 961 MobiDBLite consensus disorder prediction 489 503 - -
Psa7g4273 961 MobiDBLite consensus disorder prediction 251 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4273 Psa-Chr7 347058408 347062789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4273 14 232 MAP Kinase Kinase Kinase AT1G54960 30.153 4.68e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Psa7g4273 Pkinase 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4273 K08857 - gmx:100818747 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5992 5 515444514 515451602 Psa7g4273 7 347058408 347062789 PCT