Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4255 ATGCCAATGGAGGTTTTCTCTCTCACTTCAACTACCATTCCCTCCACTCTCACACGTAGAGACACTGCAGCAGATAAACCTTCCCCTCATCTCAACCTTTCCAAATACTCACATTTCATGAGGTACCCTCTTACCACAACACTCACCAACAACAGAATCCGCAGTAGCAGTAGCAGTAGCATAAGAGCTCAAGCTTCAGGTTCAACAAAATCTAGTACTGCTGAGGGGATTCCTGAAAAAACAGATTCCAAGGATGATAATCTAGTTTTTGTTGCTGGTGCTACTGGAAAAGTTGGTTCAAGAACAGTCAGGGAGCTTATAAAGCTTGGTTTTAAAGTTAGAGCTGGAGTAAGGAATGCTCAGAAAGCTGGTGCATTGGTTCAGAGTGTTAAACAATTGAAGCTTGATGGTGCAAGTGGAGGGGGTGAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAGGCAGATCAAATTGGATCAGCATTAGGGAATGCATCAACTGTGATATGTGCTATTGGTGCTAGTGAGAAGGAAATTTTCGACATTACTGGACCTTGTCGAATCGATTACCGAGCTACCAAAAACCTTGTTGATGCTGCAACTGTTGCCAAAGTAAATCACTTCATATTGGCAAGTGGAATTCCATATACAATAGTGAGACCTGGTGGCATGGAGAGGCGACTGACGCTTTACAAGGAAACACATAATGTAACTCTATCAACTGAAGATACTTTATTTGGGGGTCAAGTTTCAAACCTTCAGGTTGCTGAACTCATGGCAACCATGGCCAAGAATCCCGATCTTTCATACTGTAAAATAGTGGAGGTTATTGCCGAGACAACTGCGCCACTAACACCTGCCGAAAAACTTCTTACAAGGATACCTTCTCAACGCCCTTACATTCCTTCGCCAAAGAAGGTACAGAAAGCAGATACAGCAACTGTCAGTAATACAGGTCCCTCTGCTAATGTTGTAGCAGAAGTACCTAGTATTGCCCCTCAAAAAGAAACAGCACAACCAAAACCAGTGGCGAAAACGGAACAGCCACTTTCTCCTTATACCGCTTATGATGATTTAAAGCCACCATCATCTCCTTCTCCAACCAAGCCTAGTGAGAAGAAACAGATAAACATCAGTGATGCAGTTCCAACACCTATTTCTTCGGATACTCCAAGTAGCATTCAAGAAATAGATGGCATTTCTCAGACAACATCTTCCTCAAAAGGGAAGGAGTCTCTATCTCCTTACGCAGCATATCCTGATTTAAAGCCTCCTAGTTCACCATCTCCGAGTGTACCAACTACATCACTATCGAAGATAGATACAGTAGTAGTATCAAGCAATGGACCAGCTCAACTTTCTGTGGAAGATACACCAAAGAATGAAGAACAGCACCTTCATGAACCAAAGTCAAGGCCACTTTCACCTTATGCAATGTATGAGGACTTGAAGCCTCCTGCATCTCCATCACCTTCCTTCAGAAAATCCTAG 1500 0.4293 MPMEVFSLTSTTIPSTLTRRDTAADKPSPHLNLSKYSHFMRYPLTTTLTNNRIRSSSSSSIRAQASGSTKSSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQLKLDGASGGGEAVEKLEIVECDLEKADQIGSALGNASTVICAIGASEKEIFDITGPCRIDYRATKNLVDAATVAKVNHFILASGIPYTIVRPGGMERRLTLYKETHNVTLSTEDTLFGGQVSNLQVAELMATMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTATVSNTGPSANVVAEVPSIAPQKETAQPKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQINISDAVPTPISSDTPSSIQEIDGISQTTSSSKGKESLSPYAAYPDLKPPSSPSPSVPTTSLSKIDTVVVSSNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYAMYEDLKPPASPSPSFRKS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4255 499 MobiDBLite consensus disorder prediction 304 499 - -
Psa7g4255 499 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 213 444 IPR044719 -
Psa7g4255 499 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 5 214 IPR044719 -
Psa7g4255 499 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 447 498 IPR044719 -
Psa7g4255 499 MobiDBLite consensus disorder prediction 50 76 - -
Psa7g4255 499 MobiDBLite consensus disorder prediction 372 415 - -
Psa7g4255 499 MobiDBLite consensus disorder prediction 435 460 - -
Psa7g4255 499 CDD SDR_a5 89 283 - -
Psa7g4255 499 Pfam NAD(P)H-binding 93 217 IPR016040 -
Psa7g4255 499 Gene3D - 85 299 - -
Psa7g4255 499 MobiDBLite consensus disorder prediction 312 327 - -
Psa7g4255 499 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 279 IPR036291 -
Psa7g4255 499 MobiDBLite consensus disorder prediction 50 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4255 Psa-Chr7 346187199 346190374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4255 81 217 Monolignol Biosynthesis Gene Families AT5G58490 28.477 8.55e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4255 - - mtr:MTR_4g068970 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4255 7 346187199 346190374 Psa7g4255 7 346187199 346190374 ECH