Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4235 ATGTCGGATTCCGCTACTCCTCTCATGAGTTTGAAGGTACTCATTTTAGCAGGAATTTTTCTCATCATCTTAATAATTATCGTGCTTCTCATATTCTTATGCTTTCGCGGTAGCCGAAGCTGCAAGAAACGGAAGATGTTACCGAAGCTACACAGCTCCGGCACCACTCCTTTAGTTTCAAAGGAGATCGCGGTGGTTAGGGAGATTGACCTCACGCGCTCCACTGAAAAACAGACGCGGATTGAGATTATTGAAGATGATGATGATGGTGTGAAGAAGGAGGCAGAGATGAAGGTTGAAATTGGAGTGGTTAGGAAAAGTGACGTGTCGTGTGGGACCTACATGCAGGAGGATCCAAACATAGGGTGGGGTCGGTGGTATAGTTTGAAGGAAGTGGAAATTGCGACACGCGGATTTGCGGAAGGGAATGTGATTGGTGAAGGAGGGTATGGAGTTGTTTATAGAGGTGTTTTGCAAGATGGTTCTGTTGTTGCAGTTAAGAATCTTCACAACAACAAGGGTGAAGCTGAGAAGGAGTTTAAAGTGGAGGTTGAAGCCATTGGCAAAGTAAGGCATAAGAATTTAGTTCGTTTAGTAGGATATTCTGCAGAAGGTGCTAGAAGGATGCTTGTTTATGAATATGTTGAGAATGGAAATTTGGAGCATTGGCTGCATGGTAATGTAGGACCGGTTAGTCCGTTGACGTGGGAGATTCGAATCAAGATTGCCATTGGGACTGCAAAAGGGTTAACCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACAGAGATATAAAATCCAGTAACATCCTTTTGGACAAAAACTGGAATGCCAAAGTTTCGGATTTTGGACTTGCCAAGCTCTTAGGATCTGAGAAAACTCATGTAACAACGCGTGTAATGGGAACATTTGGGTATGTTTCCCCTGAGTATGCAAGCACAGGTATGCTTAACGAGCGTAGCGATGTTTATAGTTTTGGAGTTCTACTCATGGAAATAATCACGGGAAGAAGCCCTATTGATTATTCAAAACCACCCGGAGAGATGAATTTGGTAGATTGGTTTAAGGCAATGGTAGCAAGTCGTCGCAGTGACGAGCTAGTGGATCCTCGAGTTGAGATTCCACCTTCTCCAAGATCTCTGAAGCGAGTTTTACTGATCTGCCTACGCTGCATTGACTTGGATGTCATCAAGCGACCGAAGATGGGTCAAATTGTTCATATGCTTGAGTCAGATGATTTCCCCTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTCTGTGCCTTCTCAAGCAGATGTTTCCATCAAAGTTCCATATCCTCGAAAGCATATAGAACCTGCGGAAAAATCAATGCCTAGATGA 1371 0.4362 MSDSATPLMSLKVLILAGIFLIILIIIVLLIFLCFRGSRSCKKRKMLPKLHSSGTTPLVSKEIAVVREIDLTRSTEKQTRIEIIEDDDDGVKKEAEMKVEIGVVRKSDVSCGTYMQEDPNIGWGRWYSLKEVEIATRGFAEGNVIGEGGYGVVYRGVLQDGSVVAVKNLHNNKGEAEKEFKVEVEAIGKVRHKNLVRLVGYSAEGARRMLVYEYVENGNLEHWLHGNVGPVSPLTWEIRIKIAIGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSKPPGEMNLVDWFKAMVASRRSDELVDPRVEIPPSPRSLKRVLLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDSVPSQADVSIKVPYPRKHIEPAEKSMPR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4235 456 CDD STKc_IRAK 145 411 - -
Psa7g4235 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Psa7g4235 456 ProSiteProfiles Protein kinase domain profile. 139 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4235 456 PANTHER OS01G0323000 PROTEIN 1 453 - -
Psa7g4235 456 Pfam Protein kinase domain 141 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4235 456 SMART serkin_6 139 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4235 456 Gene3D Transferase(Phosphotransferase) domain 1 215 424 - -
Psa7g4235 456 SUPERFAMILY Protein kinase-like (PK-like) 120 411 IPR011009 -
Psa7g4235 456 PANTHER RECEPTOR-LIKE KINASE 1 453 - -
Psa7g4235 456 ProSitePatterns Protein kinases ATP-binding region signature. 145 167 IPR017441 GO:0005524
Psa7g4235 456 Gene3D Phosphorylase Kinase; domain 1 112 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4235 Psa-Chr7 343711149 343713093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4235 103 411 Receptor kinase-like Gene Family AT4G02010 46.006 1.11e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Psa7g4235 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4235 - - gmx:100305442 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4235 7 343711149 343713093 Psa7g4235 7 343711149 343713093 ECH