Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g4206 | ATGCAGGAAGTTCAAGAGCCTCAACCCCAATCAACACTAGGTCAAGAAGATGCAGATGAAGTGTTTGATGAAAGTTCTGCAAATGATAAAGGTGAAACACCGGAAGAGTTATTGAGTAGTCCCCCAAAAGTTGATTCTGAAGTTGAGGTTCTTCATGAGAAGGTTACCAAGCAAATTATTAAGGAAGGTCATGGCCAGAAACCTTCCAAGTATTCAACATGTTTCTTCCATTACAGGGCGTGGTCTGAGAACACGGAGCACAAATTTGAAGATACATGGCAGGAGCAACGACCAATTGAGATGGTAATAGGAAAAGAGAAAAAAGAAATGACCGGCTTGGGCATTGGGGTGGCAAGCATGAAAGCTGGGGAACGAGCATTGCTGCGTGTGAGCTGGGAATTAGGATATGGAAAGGAAGGAAGCTTTTCTTTTCCTAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGTTTTGACGAAACAAAAGATGGAAAAGCTCGCAGCGATATGACTGTAGAGGAAAGGATTGGTGCAGCAGATCGGAGAAAGATGGATGGAAATGCTATGTTTCAGGAAAATAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCCATCGCTTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACACAGCAGCCTGTCTAATTAAGCTTAGCCGCTATGAAGAAGCTATAGGACAATGCAGCATTGTATTGAGTGAGGACGAGGGCAATGTGAAGGCATTATTTAGGAGAGGTAAGGCCAGAGCAGCACTTGGTCAGACAGATGCTGCCAGGGAAGATTTTCTAAAAGCGCGTAAATATGCACCTGAAGATAAAGCAATTGCAAGAGAATTGAGGCTACTTGCTGAACACGACAAAGCTATTTATCAAAAGCAGAAAGAGATCTATAAAGGAATATTTGGACCAAGGCCTCAGCCAGTACCTAAGAAAAGAAATTGGCTTATACTTATTTGGCAGTGGTTGGTTTCAGTGTTTTATAGCTTTACAACACTCTTCAAACGTGAAAAGAACAAATCTGACTAA | 1113 | 0.4214 | MQEVQEPQPQSTLGQEDADEVFDESSANDKGETPEELLSSPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWSENTEHKFEDTWQEQRPIEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNAMFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLSRYEEAIGQCSIVLSEDEGNVKALFRRGKARAALGQTDAAREDFLKARKYAPEDKAIARELRLLAEHDKAIYQKQKEIYKGIFGPRPQPVPKKRNWLILIWQWLVSVFYSFTTLFKREKNKSD* | 371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g4206 | 370 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 31 | 331 | - | - | |
| Psa7g4206 | 370 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 71 | 163 | IPR001179 | GO:0003755 | |
| Psa7g4206 | 370 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Psa7g4206 | 370 | SMART | tpr_5 | 234 | 267 | IPR019734 | GO:0005515 | |
| Psa7g4206 | 370 | SMART | tpr_5 | 268 | 301 | IPR019734 | GO:0005515 | |
| Psa7g4206 | 370 | SMART | tpr_5 | 183 | 216 | IPR019734 | GO:0005515 | |
| Psa7g4206 | 370 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Psa7g4206 | 370 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED | 31 | 331 | - | - | |
| Psa7g4206 | 370 | ProSiteProfiles | TPR repeat profile. | 268 | 301 | IPR019734 | GO:0005515 | |
| Psa7g4206 | 370 | Gene3D | - | 39 | 164 | IPR046357 | GO:0003755 | |
| Psa7g4206 | 370 | SUPERFAMILY | TPR-like | 175 | 327 | IPR011990 | GO:0005515 | |
| Psa7g4206 | 370 | Gene3D | Tetratricopeptide repeat domain | 165 | 296 | IPR011990 | GO:0005515 | |
| Psa7g4206 | 370 | SUPERFAMILY | FKBP-like | 33 | 162 | - | - | |
| Psa7g4206 | 370 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 67 | 160 | IPR001179 | GO:0003755 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa7g4206 | 48 | 336 | Calmodulin-binding Proteins | AT5G48570 | 32.432 | 3.61e-31 | 122 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa7g4206 | - | - | gmx:100790587 | 662.144 |