Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4204 ATGAAAAGTATCACGTGTTATTTGCTGGTATTCTTCTGCGTGTTATTTACACCATGTTTTTCAATAACCGATCTCGATGCGTTGCTAAAGCTTAAAGAATCAATGAAAGGAGAGAAATCAAAACATCCCGATTCACTCGGAGACTGGAAGTTTTCCGCTTCTGGTTCAGCTCACTGCTCATTTTCCGGTGTAACGTGCGATCAAGATAACCGAGTGATAACTCTGAACGTGACGCAAGTTCCACTCTTCGGAAGAATTTCTAAGGAGATTGGAGTGTTGGATAAGCTTGAGAGACTCATCATCACCATGGATAATCTCACTGGCGAGCTTCCGTTTGAGATATCCAATCTTACCTCTCTTAAAATCCTTAACATCTCTCACAACACCTTCTCTGGTAACTTCCCCGGCAACATCACTCTCCGTATGACGAAACTTGAGGTTCTAGATGCTTATGACAATAGCTTCACTGGTCATCTTCCTGAGGAAATCGTCAGCCTCAAGGAACTCACGATCTTATGTCTGGCCGGAAACTATTTCACCGGTACAATACCCGAGAGTTACTCGGAATTTCAGAAGTTGGAGATTTTAAGCATAAACGCAAACAGTTTATCGGGGAAGATTCCGAAGAGCTTATCCAAATTAAAGACGCTGAAGGAACTCCGTTTAGGTTACAACAACGCTTACGATGGCGGAGTTCCACCGGAGTTTGGTTCATTGAAATCTCTCCGATATCTTGAGGTGTCTAACTGTAACCTCACCGGAGAAATTCCACCGAGTTTTGGAAATTTAGAAAACCTAGACAGCTTGTTCTTGCAAATGAACAACCTCACCGGAATAATTCCACCGGAACTCTCTTCCATGAAGAGTCTCATGTCGTTGGATCTCTCCAACAACGCTCTCTCAGGAGAGATTCCAGAGAGCTTCTCAAATCTCAAAAGCCTCACTCTCTTGAATTTCTTCCAGAACAAGTTTCGCGGTTCTATTCCGGCATTCATAGGCGATCTTCCTAACCTGGAAACGCTTCAGGTTTGGGAAAACAATTTCTCTTTTGTATTGCCACAAAATCTCGGTTCAAACGGAAAGTTCATTTTCTTCGACGTTACGAAGAATCACCTCACCGGATTGATTCCACCGGATTTGTGCAAATCGAAGAAATTGCAAACGTTTATAGTTACGGATAACTTCTTCCACGGTCCAATCCCTAAAGGAATCGGCGCGTGTAAGTCACTTCTCAAAATCAGAGTTGCTAATAACTACTTAGACGGGCCGGTCCCACAAGGGATTTTTCAAATGCCTTCTGTAACGATAATAGAGCTTGGAAATAACCGTTTTAACGGCCAACTACCTTCTGAAGTTTCCGGCGTTAATCTCGGGATTCTCACTATCTCTAACAATTTATTCACCGGGAGGATTCCCGCTTCAATGAAGAATCTCATATCACTTCAGACTCTGTGGCTTGACGCAAATCAGTTCGTCGGAGAAATTCCAAAGGAAGTCTTTGACTTACCAGTGTTAACGAAGTTCAACATAAGTGGTAACAACCTCACCGGTGTAATCCCAACGACGGTTTCTCAGTGTAGATCGTTGACAGCCGTTGACTTCAGCCGGAACATGATTACCGGCGAGGTTCCCAGGGGAATGAAGAATCTGAAGGTTCTCAGCATTTTTAACCTTTCACATAACAACATATCGGGTCTAATCCCCGACGAGATTCGATTCATGACGAGTCTCACCACGCTGGATCTATCCTACAACAATTTCACCGGAATAGTCCCCACCGGCGGTCAGTTTTTGGTTTTCAACGACAGGTCGTTTTTCGGAAACCCTAACCTCTGTTTCCCACACCAATCCTCATGCTCTTCCTATACCTTTCCCTCGAGTAAAAGCCACGCGAAGGTGAAGGCCATTATTACCGCAATTGCTCTCGCCACAGCAGTGTTACTGGTAATAGCGACGATGCACATGATGAGGAAGAGAAAGCTTCATATGGCGAAAGCATGGAAGTTAACAGCATTTCAGAGACTAGACTTCAAAGCAGAGGAAGTTGTGGAGTGTTTGAAAGAAGAGAACATAATAGGAAAAGGAGGAGCCGGGATCGTGTACAGAGGGTCCATGCCCAACGGAACAGACGTAGCGATAAAGCGTTTAGTTGGACAAGGAAGTGGGAGAAACGATTACGGTTTCAAAGCAGAGATAGAAACATTGGGTAGAATCAGACACAGAAACATAATGAGGCTATTGGGTTACGTTTCTAATAAGGACACAAATTTGTTGCTGTATGAGTACATGCCGAATGGTAGTTTAGGGGAATGGCTTCATGGTGCAAAAGGCTGTCATTTGAGTTGGGAAATGAGGTATAAAATTGCAGTGGAAGCTGGTAAAGGACTTTGCTATTTGCACCATGATTGTTCACCTCTTATTATTCATAGGGATGTTAAGTCCAACAATATATTGCTAGATGCTGATTTTGAAGCCCATGTTGCTGATTTTGGACTTGCAAAGTTTTTATATGACCCAGGTGCTTCTCAGTCCATGTCCTCTATTGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCTTATACGTTGAAAGTGGATGAGAAAAGCGATGTGTATAGCTTTGGAGTGGTGCTATTGGAGCTGATCATAGGAAGGAAACCAGTGGGTGAGTTTGGAGATGGAGTGGACATCGTTGGATGGATCAATAAAACTGAATTAGAGCTTTATCAGCCGTCAGATAAAGCATTGGTGTCGGCGGTGGTGGACCCGCGGCTCACTGGATACCCAATGGCAAGTGTTATCTACATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGACCCGCAAGGCCTACCATGAGGGAAGTAGTTCATATGCTCACTAATCCACCTCAGTCTACCACTCATAACAACCTTATTAATCTCTAG 2931 0.4377 MKSITCYLLVFFCVLFTPCFSITDLDALLKLKESMKGEKSKHPDSLGDWKFSASGSAHCSFSGVTCDQDNRVITLNVTQVPLFGRISKEIGVLDKLERLIITMDNLTGELPFEISNLTSLKILNISHNTFSGNFPGNITLRMTKLEVLDAYDNSFTGHLPEEIVSLKELTILCLAGNYFTGTIPESYSEFQKLEILSINANSLSGKIPKSLSKLKTLKELRLGYNNAYDGGVPPEFGSLKSLRYLEVSNCNLTGEIPPSFGNLENLDSLFLQMNNLTGIIPPELSSMKSLMSLDLSNNALSGEIPESFSNLKSLTLLNFFQNKFRGSIPAFIGDLPNLETLQVWENNFSFVLPQNLGSNGKFIFFDVTKNHLTGLIPPDLCKSKKLQTFIVTDNFFHGPIPKGIGACKSLLKIRVANNYLDGPVPQGIFQMPSVTIIELGNNRFNGQLPSEVSGVNLGILTISNNLFTGRIPASMKNLISLQTLWLDANQFVGEIPKEVFDLPVLTKFNISGNNLTGVIPTTVSQCRSLTAVDFSRNMITGEVPRGMKNLKVLSIFNLSHNNISGLIPDEIRFMTSLTTLDLSYNNFTGIVPTGGQFLVFNDRSFFGNPNLCFPHQSSCSSYTFPSSKSHAKVKAIITAIALATAVLLVIATMHMMRKRKLHMAKAWKLTAFQRLDFKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGCHLSWEMRYKIAVEAGKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWINKTELELYQPSDKALVSAVVDPRLTGYPMASVIYMFNIAMMCVKEMGPARPTMREVVHMLTNPPQSTTHNNLINL* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4204 976 Pfam Leucine rich repeat N-terminal domain 23 67 IPR013210 -
Psa7g4204 976 SUPERFAMILY L domain-like 328 622 - -
Psa7g4204 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Psa7g4204 976 Gene3D Transferase(Phosphotransferase) domain 1 763 974 - -
Psa7g4204 976 Gene3D Ribonuclease Inhibitor 23 140 IPR032675 -
Psa7g4204 976 SMART LRR_typ_2 287 310 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 574 597 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 335 359 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 550 573 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 263 286 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 478 502 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 142 166 IPR003591 -
Psa7g4204 976 SMART LRR_typ_2 239 262 IPR003591 -
Psa7g4204 976 SMART serkin_6 686 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4204 976 Pfam Leucine rich repeat 547 587 IPR001611 GO:0005515
Psa7g4204 976 Pfam Leucine rich repeat 241 300 IPR001611 GO:0005515
Psa7g4204 976 Pfam Leucine rich repeat 168 226 IPR001611 GO:0005515
Psa7g4204 976 ProSiteProfiles Protein kinase domain profile. 686 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4204 976 SUPERFAMILY Protein kinase-like (PK-like) 679 961 IPR011009 -
Psa7g4204 976 SUPERFAMILY RNI-like 75 427 - -
Psa7g4204 976 Gene3D Ribonuclease Inhibitor 345 623 IPR032675 -
Psa7g4204 976 Pfam Protein tyrosine and serine/threonine kinase 687 961 IPR001245 GO:0004672|GO:0006468
Psa7g4204 976 Gene3D Phosphorylase Kinase; domain 1 650 762 - -
Psa7g4204 976 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 6 968 - -
Psa7g4204 976 PANTHER UNNAMED PRODUCT 6 968 - -
Psa7g4204 976 Gene3D Ribonuclease Inhibitor 228 331 IPR032675 -
Psa7g4204 976 Gene3D Ribonuclease Inhibitor 141 227 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4204 Psa-Chr7 341176880 341180799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4204 17 970 Receptor kinase-like Gene Family AT1G75820 61.771 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g4204 PK_Tyr_Ser-Thr 3.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4204 K00924 - gmx:732625 1442.94