Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4196 ATGGGAGAGGTAGCGCGTGGAGGTTGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGATTCAGTTAATCATTCCCATCGAATCCGCTCACTGCACTGTTTCCTACCTCGGTGACCTTGGCCTTCTTCAGTTTAAAGATCTCAATTCAGAGAAGAGCCCCTTTCAACGAACTTATGCAACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTGCGTTTCTTCAAGGAGCAAATGTTTAAGGCAGGTGTTTCACCAAAAGGTTCCACAACACAGTTTGATGTGAACATCGATGACCTTGAGATAAAACTTTCAGAAATTGAGTCTGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACATACAATGAACTTGTTGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGTGCCATCGAGCAGCAAAGAGAATATGAATCACGCCATCTGAGTGGGGATTCTATGGAAGTACCTTTATTACAGGACCAAGAATTACCAGGTGATTCATCAAAGGCAGTTAAGTTGGGATTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGAGGCAATGTGTTTTTGAGGCAGACTGCTGTTGAGGATCCGGTTACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTCGTCTTCTACGCCGGTGAAAAAGTGAAAGCCAAGATTCTGAAAATCTGTGATGCCTTTGGTGCCAATCGATACCCCTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTACAGAGGTTTCTGGAAGGCTTGCAGAATTGAAGACCACCATAGATGCTGGACTTTTGCACCGAGTTAACTTGCTGGAAAATCTTGGGACTCAATTCGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCCATCTACCATACCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTAGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGGTCCAGGATGCATTACAGCGGGCTTCAAAGGACTCTAACTCCCAAGTCAGTGCCATTTTGCAAGTTTTGCATACCAGAGAGTTGCCACCTACCTACTTTCGCACGAACAAATTTACGTCTTCATATCAAGGAATTATAGACTCATATGGGGTTGCTAAATATCAAGAGGCAAATCCTACTGTGTTTACTGTAGTTACCTTTCCGTTTCTTTTCGCTGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGAGATGACTTTTGGGGGTCGCTATGTTATTTTCATGATGTCACTCTTCTCAATCTACACTGGCCTGATCTATAACGAGTTCTTTTCTGTTCCATTTGAACTCTTCGGCCCCTCTGCATATGAGTGTCGTGACCTTTCTTGCAGGGATTCTACCACAATAGGGCTGATAAAAACGCGTCGCACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGCAGTGAATTACCATTCCTAAACTCTTTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATGCCAATGCCAGGTTCTTTAAGAACCACGTAAATGTATGGTTCCAATTTATCCCCCAGGTGATATTTCTTAACAGTCTATTTGGCTACCTATCCCTCCTTATTATTGTGAAGTGGTGCACGGGTTCTCAAGCTGATTTGTACCATGTAATGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGCGAGAACCAACTCTTTGTGGGTCAGAAAAATCTTCAGCTCGTGCTTCTGCTTCTGGCTGGTGTCGCCGTGCCCTGGATGCTTTTGCCAAAACCCTTTATTTTGAAGAAACAACACGAAGCTACGCACGGGGATGACTCCTATGCACCACTTCCAAACACGGAGGAAAGCTTGCAAGTGGAATCAAATCATGATTCCCATGGTCATGCGGAATTTGAGTTCAGTGAAATTTTTGTACATCAACTCATACACACTATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGCTTATGGCATGGGGGTACAATAATGTGGCTATTCTGATAGTGGGTCTCCTTGTTTTCATTTTTGCAACTGTTGGAGTGTTACTTGTGATGGAAACTCTGAGTGCCTTCTTGCACGCATTGAGGCTTCACTGGGTGGAGTACCAAAACAAGTTTTATGAAGGAGATGGTTACAAGTTCCACCCTTTCTCGTTCACATTGCTAGACGAAGAGGATGAGTTGATATAA 2466 0.4303 MGEVARGGCCPPMDLFRSEPMQLIQLIIPIESAHCTVSYLGDLGLLQFKDLNSEKSPFQRTYATQIKRCGEMARKLRFFKEQMFKAGVSPKGSTTQFDVNIDDLEIKLSEIESELTEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAIEQQREYESRHLSGDSMEVPLLQDQELPGDSSKAVKLGFLAGLVPREKSMAFERILFRATRGNVFLRQTAVEDPVTDPVSGEKTEKNVFVVFYAGEKVKAKILKICDAFGANRYPFAEELGKQAQMITEVSGRLAELKTTIDAGLLHRVNLLENLGTQFEQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQVQDALQRASKDSNSQVSAILQVLHTRELPPTYFRTNKFTSSYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVIFMMSLFSIYTGLIYNEFFSVPFELFGPSAYECRDLSCRDSTTIGLIKTRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYANARFFKNHVNVWFQFIPQVIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKNLQLVLLLLAGVAVPWMLLPKPFILKKQHEATHGDDSYAPLPNTEESLQVESNHDSHGHAEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVAILIVGLLVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYKFHPFSFTLLDEEDELI* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4196 821 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Psa7g4196 821 Coils Coil 101 128 - -
Psa7g4196 821 PIRSF ATP6V0A1 11 820 IPR026028 GO:0000220|GO:0046961
Psa7g4196 821 PANTHER VACUOLAR PROTON ATPASES 5 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Psa7g4196 821 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4196 Psa-Chr7 340973647 340986233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4196 13 819 Primary Pumps ATPases(2) AT2G21410 78.094 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4196 K02154 - gmx:100810062 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4196 7 340973647 340986233 Psa7g4196 7 340973647 340986233 ECH