Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4171 ATGAAACCGAACAATCACATGGAACAGTTGAGTATACCTCAGTTTAATCAATCACAAATGCGAAGAAATCAGCATCATCATCAACAGCATCAACAGGTTCAGCAACAGAATCATCATTTTCAAGATGGAAGTAACAAGAGAGCAGGTATACCACCGTCTCACCCGCACCAGATCCCACCTATTTCACCCTACTCTCAGATCCCGGTTTCACGGCCGATAATGCCTTCCCATAACACTAGTCCTACACCTTCCCACACTCGATCACTCTCTCAGCCCTCTTTTTTCTCTCTCGATTCTCTTCCGCCTCTTAGTCCTTGTCCGTTTCGTGACTCTTCGTCCACGTCGCTCTCGGAACATGCTGACGTGTCGATGGAAGATCGTGACGTCAGCTTACCGCCGTTTGCTAGAAACCCTTCCTTGCCGCCTCGGAAATCGCACCGGCGGTCCAACAGTGATATTCCGTTTGGGTTTTCTACTGTTTTGCAGTCTTCCCCGCCGCTTATTCCTCTCAGAGGAAGAGAAATTGCGAAACCTAATCCGTCGGCGGTGAAAAGGGAAACAGGTTGGGAGAGAAATGTTGATAGTAATAATAATAATGTAGAGGAGAAGAAATCGTTTTCCCCGGAAGGTGAAGTTGTGGATGATCTTTTCTCTGCTTATATGAATTTGGATAACATTGATGCAATTAACTCAACCGGGAATGAGGACAAAAACGCGGCTGTTATTGATAATCGCGATGATTTGGATAGTAGAGCGAGTGGAACGAAGACCAATGGTGGTGATAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGGATAGTATGCAGAGGAGGGAAGGGATGAAGAGAAGCGCTGGAGGTGATATTGCACCTACTACAAGACACTATCGGAGTGTGTCGATGGATAGTTTCATTGGGAAGTTGAATTTCAATGACGAGTCTTCTAAGCTTCCGCCTTCGCCAGGTGGATTGATGTCTCCTGGTAATTCCGGTGATGGGAATTCTGCGGCTTTCAGCTTGGAGTTTGGGAATGGGGAGTTCAGTGGGCCTGAATTGAAGAAAATTATGGCGAATGAAAAACTTGCTGAGATTGCAATGGCTGATCCGAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCGGCTGCGCGTTCGAAAGAACGCAAGATGCGATACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACTGAAGCTACTACACTCTCTGCACAGCTTACTCTGTTGCAGAGAGATTCTGTTGGACTTACTAACCAGAATAGCGAGTTGAAGTTCCGACTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAGGCCCTTACTGCCGAGGTTCAAAGACTGAAGATTGCTACAGCTGAGTTGAATGGGGAGTCGTCGCATCCTTCTAACTGCATGATCCCGCAACATTCTGTCAACCCTATGATGTACCAACAACAGCATCAGCCTCCTACATCTCAACAAAACATTCATATTCAACAGCAGCAACAGCACCATCAGCAGCAACAACAGCAGAATGGTAATGCCAACTCAAAAAACGACTTAAAGCAATAA 1596 0.4593 MKPNNHMEQLSIPQFNQSQMRRNQHHHQQHQQVQQQNHHFQDGSNKRAGIPPSHPHQIPPISPYSQIPVSRPIMPSHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCPFRDSSSTSLSEHADVSMEDRDVSLPPFARNPSLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGREIAKPNPSAVKRETGWERNVDSNNNNVEEKKSFSPEGEVVDDLFSAYMNLDNIDAINSTGNEDKNAAVIDNRDDLDSRASGTKTNGGDSSDNEAESSVNESGDSMQRREGMKRSAGGDIAPTTRHYRSVSMDSFIGKLNFNDESSKLPPSPGGLMSPGNSGDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELNGESSHPSNCMIPQHSVNPMMYQQQHQPPTSQQNIHIQQQQQHHQQQQQQNGNANSKNDLKQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4171 531 SUPERFAMILY Leucine zipper domain 373 424 IPR046347 GO:0003700|GO:0006355
Psa7g4171 531 Coils Coil 389 423 - -
Psa7g4171 531 MobiDBLite consensus disorder prediction 29 43 - -
Psa7g4171 531 CDD bZIP_plant_RF2 374 423 IPR044759 GO:0003700|GO:0006355
Psa7g4171 531 MobiDBLite consensus disorder prediction 237 297 - -
Psa7g4171 531 SMART brlzneu 369 433 IPR004827 GO:0003700|GO:0006355
Psa7g4171 531 MobiDBLite consensus disorder prediction 490 531 - -
Psa7g4171 531 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 70 522 - -
Psa7g4171 531 MobiDBLite consensus disorder prediction 176 208 - -
Psa7g4171 531 MobiDBLite consensus disorder prediction 108 150 - -
Psa7g4171 531 Coils Coil 506 526 - -
Psa7g4171 531 MobiDBLite consensus disorder prediction 253 277 - -
Psa7g4171 531 Pfam bZIP transcription factor 373 427 IPR004827 GO:0003700|GO:0006355
Psa7g4171 531 Coils Coil 452 472 - -
Psa7g4171 531 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 70 522 - -
Psa7g4171 531 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g4171 531 MobiDBLite consensus disorder prediction 1 44 - -
Psa7g4171 531 Gene3D - 372 424 - -
Psa7g4171 531 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 371 434 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4171 Psa-Chr7 339445155 339451000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4171 40 493 bZIP Transcription Factor Family AT4G38900 60.279 4.38e-163 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g4171 bZIP_1 6.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4171 - - mtr:MTR_4g072090 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4171 7 339445155 339451000 Psa7g4171 7 339445155 339451000 ECH