Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4167 ATGGGCTTCCGCATAACAAGTATTATCAGAAGAGCATCATTTTCCAGAACCCAAGGATCTACCAAGGGATCTGAAGTCCCTAAAGGCTATCTTGCCGTCTATGTTGGAGATAAAATGAGTCGGTTTGTGATTCCGATATCATACTTGAACCAACCATTGTTTCAAGAAGTATTAAATGAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATCCCATGCAGTGAAGATGAATTCATAAACCTCACTTCTCGCTTGAGTTGA 276 0.4058 MGFRITSIIRRASFSRTQGSTKGSEVPKGYLAVYVGDKMSRFVIPISYLNQPLFQEVLNEAEEEFGYDHPMGGLTIPCSEDEFINLTSRLS* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4167 91 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Psa7g4167 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 90 - -
Psa7g4167 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4167 Psa-Chr7 339213573 339213848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4167 25 83 Calmodulin-binding Proteins AT3G43120 55.932 9.10e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4167 K14488 - gmx:100786095 153.68