Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4166 ATGGGTTTTCGTTTCCCTGGTATCATTAGAAGCGCATCATTTTCTGCAAAACAAGGAGTTTCAAAAGGTGTAGAGGTGCCAAAGGGATATGTTGCTGTGTATGTTGGAGAGAAGCAAAAGAGATTTGTCATCCCAGTATCATACTTGAATCAACCGTCGTTTCAAGACTTGCTGAGCCAAGCCGAGGAAGAGTTTGGATACGATCATCCCATGGGTGGCCTCACCATTCCTTGCACAGAAGATGTCTTCCAACATATAACTTCCGGCTTGAACGGGCTATGA 282 0.4468 MGFRFPGIIRSASFSAKQGVSKGVEVPKGYVAVYVGEKQKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSGLNGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4166 93 Pfam Auxin responsive protein 17 88 IPR003676 GO:0009733
Psa7g4166 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
Psa7g4166 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4166 Psa-Chr7 339212316 339212597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4166 25 86 Calmodulin-binding Proteins AT3G43120 51.613 3.34e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4166 K14488 - gmx:100816803 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4166 7 339212316 339212597 Psa7g4166 7 339212316 339212597 ECH