Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4162 ATGGTACTTTTCACAACGATTATCTTCTATAACCGTGGTGAAATGATCTCGAAATGGATATTCAGTCAATTATATGAATGTCCCATTTGTAAATGGCCGTATAGATCTGAAGATGAGGTTTTTGAACGTGTTGAAAGTTGTCTGAGCAATCTAGTTAGAAACGATGATGATAATGGAAATTTGGTTGAGAGTGAAGTTTTTGTTGAGAGTAATAATGAGTTGGAGATTTTTGTTGGGGATTATGTTTCGGGGAATCTATCCGAAGAATCAGTTGATATTGTTTTGAAATTGTTGATGAATATTGTTAAGGAGCCTGAGAATGCTAAGTTTAGGAAGATTAGGTTGAGTCATCCAAAGATTAAGGAAGTTGTTGCTAAGGTTAGTGGCGGTATTGAGTTGTTGAGATTTTTTTTATTTGAACTTAAGGAGGAGAAAGGAGAGACATATGCGTTGACTGAGGTTCCTACTGAGGAGAAGAGCGAAGAAAGAGTGAGGAAGAAGAGAGAAAGAGAGGTGACGACTAGGGATTTGGTGAAGAGAGAAGAAGAGACAAAGAGACGAACTCGTCTTCTTTGA 576 0.3733 MVLFTTIIFYNRGEMISKWIFSQLYECPICKWPYRSEDEVFERVESCLSNLVRNDDDNGNLVESEVFVESNNELEIFVGDYVSGNLSEESVDIVLKLLMNIVKEPENAKFRKIRLSHPKIKEVVAKVSGGIELLRFFLFELKEEKGETYALTEVPTEEKSEERVRKKREREVTTRDLVKREEETKRRTRLL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4162 191 Gene3D - 83 170 - -
Psa7g4162 191 SMART PGNneu 89 156 - -
Psa7g4162 191 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 22 160 - -
Psa7g4162 191 CDD PUB 87 170 - -
Psa7g4162 191 Pfam PUB domain 88 157 IPR018997 -
Psa7g4162 191 SUPERFAMILY PUG domain-like 85 153 IPR036339 -
Psa7g4162 191 MobiDBLite consensus disorder prediction 152 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4162 Psa-Chr7 339137846 339139102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4162 24 160 C2H2 Transcription Factor Family AT2G01650 50.704 1.39e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4162 K14011 - gmx:100779271 143.665