Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4156 ATGGGCTTTCGTTTATCTAGTATCATCAGAAGAGCATCGTCATCTTCAAAAACAGTGGACGTGCCAAAGGGATATCTTGCGGTATATGTTGGAGAGAAAATGAAGCGGTTTCTGATCCCAATAACATACTTGAACCATGCCTCATTCCAAGAATTACTGAGCCAAGCTGAGGAACAATTCGGATACGACCATCCAACGGGTGGTCTCACAATTCCTTGTGGAGAAGACTTGTTCTTGGATATCACTTCTCGCTTGAGTGTCTGCTAA 267 0.4345 MGFRLSSIIRRASSSSKTVDVPKGYLAVYVGEKMKRFLIPITYLNHASFQELLSQAEEQFGYDHPTGGLTIPCGEDLFLDITSRLSVC* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4156 88 Pfam Auxin responsive protein 12 84 IPR003676 GO:0009733
Psa7g4156 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Psa7g4156 88 PANTHER SMALL AUXIN-UP RNA-RELATED 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4156 Psa-Chr7 338940461 338942979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4156 20 78 Calmodulin-binding Proteins AT3G43120 57.627 9.66e-21 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4156 K14488 - gmx:100786095 135.576