Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4149 ATGGGTTTCCACAGTATTATCAGAAGAGCGTCATTTTCCGGAACCCAAGGATCTACCAAGGGATCTGAAGTCCCTAAAGGCTATCTCGCCGTCTATGTTGGAGATAAAATGAGGCGGTTCGTGATTCCAGTTTCATACTTGAATCAATCATTGTTTCAAGAATTATTAAATCAAGCAGAACAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCATGCAGTGAAGATGAATTCCTAAACCTCACTTATAGCTTGAGCGAATCGTAG 276 0.4058 MGFHSIIRRASFSGTQGSTKGSEVPKGYLAVYVGDKMRRFVIPVSYLNQSLFQELLNQAEQEFGYDHPMGGLTIPCSEDEFLNLTYSLSES* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4149 91 Pfam Auxin responsive protein 11 85 IPR003676 GO:0009733
Psa7g4149 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 4 89 - -
Psa7g4149 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4149 Psa-Chr7 338765374 338765649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4149 13 81 Calmodulin-binding Proteins AT3G43120 52.174 2.74e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4149 K14488 - gmx:100789280 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4149 7 338765374 338765649 Psa7g4149 7 338765374 338765649 ECH