Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4142 ATGGGTTTTCGTTTCCCTAGTATCAACAGAAGCGCATCATTTTCTACAAAACGAGGAGTTTTAAAAGGTGTGGACGTGCCAAAGGGATATCTAGCAGTATATGTTGGAGAGAAACAAACACGGTATGTGATTCCTGTGCCATACTTGAATCAACCATTGTTTCAAGACTTGTTGAGTCAAGCCGAGGAAGAGTTTGGATACAATCATCCGATGGGTGGCCTCACCATTCCTTGCACAGAAGATGTGTTCCAAAATACTACTTCTAGCTTGAATGGTCTGTAA 282 0.4184 MGFRFPSINRSASFSTKRGVLKGVDVPKGYLAVYVGEKQTRYVIPVPYLNQPLFQDLLSQAEEEFGYNHPMGGLTIPCTEDVFQNTTSSLNGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4142 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 91 IPR003676 GO:0009733
Psa7g4142 93 PANTHER AUXIN-INDUCED PROTEIN 6B 8 91 - -
Psa7g4142 93 Pfam Auxin responsive protein 21 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4142 Psa-Chr7 338283021 338283302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4142 25 84 Calmodulin-binding Proteins AT3G43120 55.000 6.10e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4142 K14488 - gmx:100789280 140.198