Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4127 ATGGAATTCATCGGAAAAACCATTCACAAAGAGGTGAAAGGGCTTGGGATTGTGTCCGGAACTGTGAAATCTTGTGACTCTTCCTCGGGTTTTTTGAGGATCCTTTTCGAAGACGGTCATTATGACGAGATGGAAATTTCCGAAGTTGCTCCGCTCTTGGAAATTCAACCGGAGCTTCCTAAAGTTAAGGCTCGGGTCGGTCGGAAACCTAAGAAACGACGGATGCTTGAGCGGAGCGGCGGAGCGACATCGTCTTCAGGTAATGTTACTGATAGTTTGGTGGCGGGTAGTGAATTTAGCGGGAATGAAGGGAATCTTAGCGTTAGTGTGAATGGAACTAGTGGGAGTGTGGGAAAACTAGGAAATGAAAATGGCTTTGGTGTTGATCAGATTTTGAATTTGAACGAGGCTGTTTCTGATATTAATAATAATAATAATGATACTAATGGAATTTTTGTTAAAGATGATATTGATTTGAATTCTGGGCTTAATTTGAATGAGGATATCGATTTGAATGATGTGTGTGAATCGCCGTTTAACAATGAGGGTGATTTGAATAGAAGAGATGGTATTGATTTGAACTTGGATGTGGATGTGAATGCGAATGACAAGGAGGGTGTGAATTTGGGAGAGGAATTTTTGCGGCGGGAATGTAATTTTGATTTGAACGTTGGTGTGTGTGAAGAATTTAAGGAAGCTCAGGGTTGTGCTGATGGAAATGGATATTTTGAGGTAGATTGTGAGATGGGACAGCTGCGAGAACAAGAGGCGGATGTTAAGTGTAGGTCTATGGAAGTGGATGGTGTTCGTGATAATTTGAATTGTGCCTCTGATGCTATCAAATTGGAGGAAAAGGAAGTTGATGGTTCTGTTTCCCTCGAAGCTGGTGTTGTCGCAGTTAACGAATACCAATCGGATCCTGGAAGTCCATGCAAACAAGGAAGTAGTCAGAGGAAGAGAAGAAAAGTGTCGGATAATATAAAGGCTACCCCGGACACGGCTTTGAGGAGGAGTTCTCGCCGGACATCCGCTAGAAAGCTAGTTTCAACTCCAGTATCAGAGCAGGTTACTGACGATCCTTTGTCGTCCTTGGAAACCAGTGTAGCAGAAGAAAAACCTTTGATACCTGAAAATGAGAAATATGAACAGTGCAATGTTCCTATTCCGAAGCTGCAATTACCCCCTTCATCCGAAAATTTGAATTTAGATGGCATTCCTGTTGTTGAATTTTTTTCTGTTTATTCTTGTTTAAGATCATTCAGTACCTTGTTGTTTTTGAGTCCATTTGAGCTGGAACATTTTGTAGCTGCACTTAAGTCTGAAATCCCTAGTGTATTATTCGATAGCATTCATGTTTCTATTTTGCTTACTCTGAGAAAGCATTTGGAATTCCTTTCCACTGAGGGTTGCCAATCTGCATCTATTTGCCTGAGGAATCTTAACTGGGATTTCTTGGACATTGTCACATGGCCCATGTTCTTGGCCGAGTACCTTCTGATTCACAGTTCACAATATAAAACTAGTTTTGATGCTAACCTCTCAATATTGGTAACTGATTACTACAAACAACCTGTCATTTTGAAGCTTGAGATTCTTCAGTACCTGTGTGATGATATGATTGAAGCAGACACCATAAGGTCAGAGCTTAACAGAAGGTCCTTGGTAACAGAGACTGGCATGGGTATTGATCAGAATATTTATTTTGACACTAGCAAGAAAAAGAAAGCTGTAATGGATGTTTCTGGAGGCTCTTCCTTGACTGAGGAGATGGTAGATGACACAACTGACTTGAACAGTGATGAATGTTGCCTTTGCAAGATGGATGGAAATTTAATATGTTGTGATGGTTGCCCTGCTGCATACCACTCAAGGTGTGTCGGGATTGCAAGTAACAATCTGCCTGAAGGTGACTGGTATTGCCCTGAGTGTGCTATTGGCAAACACCAGGCATCGATGAAATCACGAAGGTCACTCCGAGGAGCAGACTTGTTGGGGATGGATCCTCACGGCTGTCTTTATTTTGATAGTTGTGGTTACCTGTTAGTTTCAAAGTCATCAGATGCGAGGTCCTTGTTCAATTACTACCATGTAAATGATATACCTGTTGTGATTGAAGTTCTAAAATCCGTGGATACTTTATATGGAGACTTATTAATGGCTATCTACAAGAATTGGGATATTCCGGCTGACTTAAATGCAGGGGCTAGTAATTTGGCAGTCTTTAATCAAAGTTCATTCAAGAACATGCAAATGACGGCTAAATATTATTCTACGTCCACATCTTTAGCACCTTTTACTTCTTCAGTAACATTTATGGACAAAAATCTAGTTGATGATCAGAAAAAGTTGGAGAAAAATTCAACTATTGACTCAACAATAGAAAGTCCTTGTATTGCCTCGGAAGGATCAGCTGATACAGCACAGATGAGATCTGGCATTGAGAGTATTCAGATGCACAGGCTATACGATTCCAATAGATCGGATGAATCCTTAAATCAATCAAGAATACCAGAAAAAGACTTTCCTGTTGGTGACTGTTCTTTGGCATCTTCCAGACTAGACGGGGAACATAATATTAAGTTAAGATCCATAGCTGCCCACAAGGAAAAATGCGGATGGTGCTTTTCTTGCAAGGTTGCAAATGATGACAGAGATTGCATATACCTTTCTGCGGTGAAACCACTTTATGAAGTGTCTACAAGTACTTCAGTTGGGCCTCAACCCAAGATCCAGAATGGACATCTTAGAGAGATAATATGTCAAATTTTCTCTCTTGAGGTTCGATTGCGTGGCCTTTTATCGGGTCCATGGTTGAATCTGCATCAAACTAATCTTTGGCATGAGGATCTTTTGAAGACATCTGATCTTCTTTCTGTTAAACGATTATTGCTTCTTTTGGAATCCAATTTGAGACATCAAGCACTTTCAGCCGATTGGTTAAAACATGTGGATTCTGTGGTTACTATGGGATCAGCTACTCATATTGTGGTGGGTTCATCACGCACATCCTCAAAGCACGGTATTGGAAAGAAAAGAGCCAGACATTCAGATATTGAATCCAGTTCATCTTCAAAGACTACCGGTGGTTTGGGAATGTATTGGTGGAGAGGTGGTAGGCTTTCTCGAAAGTTGTTTAATTGCAAGGTCCTGCCTCGCTCCTTTGTTACCAAGGCTGCTAGACAAGCTGGGTTTACAAAGATACCAGGTATTTTATATCCTGAAAATTCAGACTTTGCCAAGAGAAGTAGATGTGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGTTGATCAGCTGGCTTTACAGGTTAGAGAACTCTACTCAAACATAAGGTGGCATGATATTGAGAATAACCATCCTCTATATGTGCTGGACAAGGAATCTAGAAAATCATCCAAGCTATTCAAAAAAGCAATTGTGCGTAGGAAGTTGCCAGATGGACAATCTGTGAAATACCTTCTAGATTTTGGGAAGAGGAGGGCTATTCCGGATATTATTACTAAACACGGTTCTTTATTGGTGGAGGAACCCGAAAGTGAGAGGAAGAAGTATTGGCTGAACGAGTCTTATGTTCCTTTACGTCTTGTAAAGAATTTTGAGGAAAAAAGAATCGTCCGCAGGTCCAATAATAAGAAACATGGAAAAATTATTGGGATTGATAGAGTAAAGAGGGCTCCTCAACAAAGGGGGTTTTCATATTTGTTTTCTAGAATGGAAAGATCTGTTTGTCATCAGTGTGAGCATTGCAAAAGAGATGTTCCAATCAGGGAAGCTGTGAGTTGCATTTATTGCAAAGGATATTTTCACAAGAGGCATGTCAAGAAATCTGGCGGCACAACTACTGAATGCACATATTCATGTCACAGATGCCAGGATGGGTTGCAAGTAGAGACTAATACTAATGGAAGGAAAGTTGGCACAAAACTGCCGAAGATTCAATCACAGAATTGTAAAAGTGATCCATTGGTCTGTAAATCAGCGAACGTTAAAGGCAATAAAAAGGCATCAAGTAAGGTGCGGAAGGTGATATCTCAAAACAATAAGATCCAATCGGTTGTACCTCTTCGTCGTTCTACTAGAAAAGTCAAATCCATGTATTCGCGCAATCAAATGATTGGAGGATATAAAAAAGGAATGCAGAGTAAAAAGAATGTAGGGCGTAAAAAAGGAAAGCACGGTAAATCCAAGAAGGCAACCTCTCAAAAGTCCAAGAAAACTACTGGTCAACGCAAGACGTGGGAAGTAACTATTGCACGTGAGAAGAGATCAGAACATTTTAGCAGTTACTGGCTTAACGGTCTTTGGTTTTCTAGAAAGCCAAATGATGAACGAGTAATGCTTTTTGAAGCGAAAAAGCGTACTATCCCCGCTGTTATTTCTGGTTCCTTTGATTATCCTAAATGCCGCCTTTGTTGTGGAGATGAATCTACTTCAAATTATATTGCTTGTGAAAAATGTGGAGATTGGTTTCATGGGGATGCTTTTGGTCTCACCGAAGAGAATGCTAGTCAACTTATTGGGTTTAAGTGCCATGTTTGTCGTGGAAGGGATGCTCCAATCTGTCCACATGTGAAAATTAATGCATTGTCTCGCATTGAATCCAATGCCGCAATTGAACGTGCAGAGGAGTGA 4635 0.4065 MEFIGKTIHKEVKGLGIVSGTVKSCDSSSGFLRILFEDGHYDEMEISEVAPLLEIQPELPKVKARVGRKPKKRRMLERSGGATSSSGNVTDSLVAGSEFSGNEGNLSVSVNGTSGSVGKLGNENGFGVDQILNLNEAVSDINNNNNDTNGIFVKDDIDLNSGLNLNEDIDLNDVCESPFNNEGDLNRRDGIDLNLDVDVNANDKEGVNLGEEFLRRECNFDLNVGVCEEFKEAQGCADGNGYFEVDCEMGQLREQEADVKCRSMEVDGVRDNLNCASDAIKLEEKEVDGSVSLEAGVVAVNEYQSDPGSPCKQGSSQRKRRKVSDNIKATPDTALRRSSRRTSARKLVSTPVSEQVTDDPLSSLETSVAEEKPLIPENEKYEQCNVPIPKLQLPPSSENLNLDGIPVVEFFSVYSCLRSFSTLLFLSPFELEHFVAALKSEIPSVLFDSIHVSILLTLRKHLEFLSTEGCQSASICLRNLNWDFLDIVTWPMFLAEYLLIHSSQYKTSFDANLSILVTDYYKQPVILKLEILQYLCDDMIEADTIRSELNRRSLVTETGMGIDQNIYFDTSKKKKAVMDVSGGSSLTEEMVDDTTDLNSDECCLCKMDGNLICCDGCPAAYHSRCVGIASNNLPEGDWYCPECAIGKHQASMKSRRSLRGADLLGMDPHGCLYFDSCGYLLVSKSSDARSLFNYYHVNDIPVVIEVLKSVDTLYGDLLMAIYKNWDIPADLNAGASNLAVFNQSSFKNMQMTAKYYSTSTSLAPFTSSVTFMDKNLVDDQKKLEKNSTIDSTIESPCIASEGSADTAQMRSGIESIQMHRLYDSNRSDESLNQSRIPEKDFPVGDCSLASSRLDGEHNIKLRSIAAHKEKCGWCFSCKVANDDRDCIYLSAVKPLYEVSTSTSVGPQPKIQNGHLREIICQIFSLEVRLRGLLSGPWLNLHQTNLWHEDLLKTSDLLSVKRLLLLLESNLRHQALSADWLKHVDSVVTMGSATHIVVGSSRTSSKHGIGKKRARHSDIESSSSSKTTGGLGMYWWRGGRLSRKLFNCKVLPRSFVTKAARQAGFTKIPGILYPENSDFAKRSRCVAWRAAVEMSTSVDQLALQVRELYSNIRWHDIENNHPLYVLDKESRKSSKLFKKAIVRRKLPDGQSVKYLLDFGKRRAIPDIITKHGSLLVEEPESERKKYWLNESYVPLRLVKNFEEKRIVRRSNNKKHGKIIGIDRVKRAPQQRGFSYLFSRMERSVCHQCEHCKRDVPIREAVSCIYCKGYFHKRHVKKSGGTTTECTYSCHRCQDGLQVETNTNGRKVGTKLPKIQSQNCKSDPLVCKSANVKGNKKASSKVRKVISQNNKIQSVVPLRRSTRKVKSMYSRNQMIGGYKKGMQSKKNVGRKKGKHGKSKKATSQKSKKTTGQRKTWEVTIAREKRSEHFSSYWLNGLWFSRKPNDERVMLFEAKKRTIPAVISGSFDYPKCRLCCGDESTSNYIACEKCGDWFHGDAFGLTEENASQLIGFKCHVCRGRDAPICPHVKINALSRIESNAAIERAEE* 1545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4127 1544 MobiDBLite consensus disorder prediction 344 364 - -
Psa7g4127 1544 MobiDBLite consensus disorder prediction 1382 1405 - -
Psa7g4127 1544 SUPERFAMILY FYVE/PHD zinc finger 1466 1517 IPR011011 -
Psa7g4127 1544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 593 661 IPR013083 -
Psa7g4127 1544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1463 1521 IPR013083 -
Psa7g4127 1544 SMART PHD_3 601 644 IPR001965 -
Psa7g4127 1544 SMART PHD_3 1468 1515 IPR001965 -
Psa7g4127 1544 MobiDBLite consensus disorder prediction 64 88 - -
Psa7g4127 1544 MobiDBLite consensus disorder prediction 1002 1023 - -
Psa7g4127 1544 SMART testlast3 404 464 IPR018501 -
Psa7g4127 1544 ProSiteProfiles Zinc finger PHD-type profile. 599 646 IPR019787 -
Psa7g4127 1544 SUPERFAMILY FYVE/PHD zinc finger 584 645 IPR011011 -
Psa7g4127 1544 ProSitePatterns Zinc finger PHD-type signature. 602 643 IPR019786 -
Psa7g4127 1544 CDD PHD2_CHD_II 602 643 - -
Psa7g4127 1544 PANTHER PHD FINGER FAMILY PROTEIN 1 828 - -
Psa7g4127 1544 PANTHER PHD FINGER FAMILY PROTEIN 858 1530 - -
Psa7g4127 1544 MobiDBLite consensus disorder prediction 1374 1413 - -
Psa7g4127 1544 MobiDBLite consensus disorder prediction 304 365 - -
Psa7g4127 1544 Pfam PHD-finger 602 644 IPR019787 -
Psa7g4127 1544 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 858 1530 - -
Psa7g4127 1544 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 1 828 - -
Psa7g4127 1544 ProSiteProfiles DDT domain profile. 404 464 IPR018501 -
Psa7g4127 1544 Pfam DDT domain 409 460 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4127 Psa-Chr7 337340300 337349585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4127 1 729 PHD Transcription Factor Family AT5G12400 41.492 4.85e-150 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Psa7g4127 DDT 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4127 - - mtr:MTR_4g076180 2120.51