Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4108 ATGGCATCAATGGAAGACATGAACATGAGTAATGAAGAAATTACACTTCCTGGATTCCGATTTCACCCTACAGAAGAAGAACTCCTTGATTTCTACCTTAAAAACATGGTCGTCGGCAAGAAACTTCGCTACGATGTCATTGGTTTTCTCAACATCTATCACCATGATCCTTGGGATTTGCCAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTCTTTGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAACCGCACAACTGAAAAAGGGTTCTGGAAAGCAACCGGTTCGGACCGGAAAATCGTGACGTTATCGGATCCAAAGCGGATCATCGGGTTGAGGAAGACGTTGGTTTTCTACAAAGGAAGAGCTCCACGAGGAAGCAAGACCGATTGGGTCATGAATGAGTATCGTTTACCTGACAATAGCCCCTTGCCTAAGGACATAGTGTTGTGCAAGATATACAGAAAGGCAACTTCGTTGAAAGTGCTTGAACAAAGAGCAGCTGAAGAAGAAGAGATGAAACAAATGGTGGTGGGTTCTCCTACATCCCCACCTTCCTCTACGGACACAATCTCCTTTAACTACACACAACAAGACCAACACGTGTCATTACCGATATTGTTCCAACAAGTTATTCCTAAGGAAGAATCCCAACATGAAACAGAGACAAAAACTCATGATATGGTTTCTCAGGTGACCATGACTGAGAAACCATGTCATAATAACAAAAAAGCTTGTGGAACATCGTTGCAATTGCCCTTAGGGAAGGACAATGTTCCTGAGTTACAGTTACCTATTGTAACGGATTGGACTCAAGATACCTTTTGGACTCAGCTTAACAGTCCTTGGCTACAAAACTGGACTGCTTACTCCAACATCCTCAATTTCTAG 906 0.4305 MASMEDMNMSNEEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMVVGSPTSPPSSTDTISFNYTQQDQHVSLPILFQQVIPKEESQHETETKTHDMVSQVTMTEKPCHNNKKACGTSLQLPLGKDNVPELQLPIVTDWTQDTFWTQLNSPWLQNWTAYSNILNF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4108 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 301 - -
Psa7g4108 301 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 11 301 - -
Psa7g4108 301 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Psa7g4108 301 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Psa7g4108 301 SUPERFAMILY NAC domain 11 161 IPR036093 GO:0003677|GO:0006355
Psa7g4108 301 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4108 Psa-Chr7 336176637 336178627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4108 11 298 NAC Transcription Factor Family AT2G17040 60.884 1.15e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g4108 NAM 3.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4108 - - gmx:100816770 457.218