Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4090 ATGTCTGTTCAGACTTGCGAGAGAAATTGTATGGGGCCCAAAAACCCTTCAAGAGGGAAGTTTCAGGCTTCTATTGGAGTACATGAGATTTTCAGCCCAGAGATATGGAAAGCAGCTTTAACAGAATTAGTTGCAACTGCCTCACTAATGTTCACCTTGTCTACCACCATTATTGCATGCTTGGACTCACATGAAGTTGATCCTAAGCTTAGTGTCCCCTTTGCAGTCTTCATCATAGTCTTCTTATTCCTAATTGTCACAGTTCCTCTATCTGGTGGCCATATGAGCCCTGTTTTCACATTAATAGCTACTCTAAAAGGTGTTACCACTCTTTCTCGTGCACTCCTTTATATCTTAGCACAATGCATTGGCTCGATAATTGGTTTCTATATACTCAAGTGTGTGATGGATCCAAGACTAGTAAACACATATTCATTGGGAGGTTGTGCTATTGGTGGCAAAGGACTTAATTCTAGTATCAATCAGTATGAAGCTTTGTTATTGGAATTCTCTTGCACATTTTTAGTACTCTTTTTGGGTGTCACATTGGCTTTTGACAAAAAAAGGTCAAAGAATTTGGGCTTGCCGATGGTATGTTTGGTGATAGCTGGAGCCATGGCATTGGCAGTGTTTATGTCCATAACTGTAACTGGACGGGCTGGTTATGCTGGTGTTGGGCTTAACCCAGCAAGATGCCTAGGTGCTGCATTGGTTCATGGAGGTTCACTATGGGATGGGCTTTGGATTTTTTGGGCTGGGCCTATTTTGGCCTGTTTAATCTATTATAGTGTCTCTATCAACCTACCAAAAGACAGTTTGGTTTTGATGGACGGAGAAAATGATGGCTTAAAGTTGCCTCTTGGTTCTAGTGTGACAATACCTAATGGTGACATTTCAAAGGAGACTTTTTATTCTGCCTCTCATGTTTCTCAAAACACTTGA 942 0.4119 MSVQTCERNCMGPKNPSRGKFQASIGVHEIFSPEIWKAALTELVATASLMFTLSTTIIACLDSHEVDPKLSVPFAVFIIVFLFLIVTVPLSGGHMSPVFTLIATLKGVTTLSRALLYILAQCIGSIIGFYILKCVMDPRLVNTYSLGGCAIGGKGLNSSINQYEALLLEFSCTFLVLFLGVTLAFDKKRSKNLGLPMVCLVIAGAMALAVFMSITVTGRAGYAGVGLNPARCLGAALVHGGSLWDGLWIFWAGPILACLIYYSVSINLPKDSLVLMDGENDGLKLPLGSSVTIPNGDISKETFYSASHVSQNT* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4090 313 PANTHER AQUAPORIN-LIKE 1 296 - -
Psa7g4090 313 SUPERFAMILY Aquaporin-like 33 260 IPR023271 -
Psa7g4090 313 Pfam Major intrinsic protein 32 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4090 313 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4090 313 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4090 313 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4090 313 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4090 313 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g4090 313 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 296 - -
Psa7g4090 313 Gene3D Glycerol uptake facilitator protein. 23 269 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4090 29 260 Major Intrinsic Protein MIP AT3G53420 30.400 1.91e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4090 K09866 - gmx:100804160 429.483