Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4071 AGCTTCTCGAAGACACCAATGGCGGTCTCGTCATTCTCTCTTCAGGTCTCTCTCTATCGAAACTCATTTCATCTCTTCTCCTTCTTCACTCCACTTCTCAGGGAACACTTCTCATTCTATCTCCTTCCTCCGCCACTCTCAAATCCAAAATCAATTTCCATCTCAAAACCCTAAACCCCCAATTCTACCAAGTCCCCGTCGAAATCACCGCCGACCTCCCCGTTAACCACCGCCACTCCCTCTACTCTTCCGGCTCCGTCTGTTTCATTACCCCTAGAATCCTCATCGTTGATCTTCTCACTAATAAACTACCTGCCTCAATTATCTCCGGACTCATCATCCTCAACGCTCATTCCGTTTCGGAGACTTCCACTGAAGCTTTTATTGTTAGGATTTTTCGTTCTCTCAATCGAAGTGCGTTTGTTCGTGTTTTCTCCGATAGGCCACAAGCGATGGTTTCGGGTTTTGCGAAGGCGGAGAGAACTATGAAGTGTTTGCATATTCGTAAGCTGCATCTTTGGCCGAGATTTCAGGTTTATGTTTCGCAGGAGCTTGAGCAGGACCCGTCGGATGTTGTCGATATTAGGGTTCCGATGAGTAAGTACATGATGGGGATTCAGAAGGCTATTGTTGAAGTTATGGGTGCGTGCTTGAAGGAGATGAGGAAGACGAATAAGGTTGATGTGGAGGATTTGACTGTGGAGAATGGGTTGTTCAAGTCGTTTGATGAGATTGAGTTTGTGAAGCATTTAGAGTCCACTGCCACTAGCAATGAAGATGTTGAATACAAGTATCTTCCTAGTTGTCCAGATGATGAGCCTCAGAAGAAAATTAATCAAGGTACCATTCTTAGCAACATTCAATGGAAGAAATTTGGACTTCTTTGTTTTGTTTGGATTGCAGTTCTTCTCTTGCAGATTGCCAAGAATTATACAGCTACATGTTCAATCAAATACTGGTTACTAACTTTGTTACAGACACCAGTTACTGTTGGGGTTTCAATGTACCAAGCAATAGGCCTATATCAAGGGAAGAAGATTACAGTTTCTAAGCAAGATCATGGCACACATTGGCCTTTGCATCTTCTGATTGTATCACTTTCATGTGCTTTGCTAGCTGGAATATTGGGTGGACTTCTTGGTGTAGGTAGTGGATTTGTCATGGGTCCTTTGTTTATCGAATTCGGAATCGCGCCTCAGGTAGCAAGTGCCACGGCCACATTAGGAATGACATTCACAGCATCTATATCGGTTGCGCAATATTTTCTCTTGAATCGATTTCCGGTTCCTTATGCTCTGTATCTTACCATTGTGGCTACAATTGCAGCATACATAGGACAGAAAATAATTGACAGGCTTGTCAATATCTTTCAAAGAGCTTCTTTGATTATCTTTGTCTTATCCTTCACAATTCTTGTTAGTGCAATTGCACTAGGTATAGGCAGTATGGCTTGTGGGAAAGATTGGTTCTATGCACAGGTTACAAGAAAGAAAAATGAAGATATTTATGAAGGAACTACATGGCAAATAAAGTTTAACCTAGATGACGTGGAAAAAGATGAAATATATAAATTGCGATTGGCTCTTGCAAGTGCAAATGTCTCTGAATTACAGGTTCGAGTGAACAGTGTTAAACAAGATCCTCCAATATTTAGTACTGGAGTTATTGGAAAAGATTATGCAATAGGGAGACATGGCATTCATGGACTTTATTGGCTATTCAACATTGATGTACCAAGTCTTTTGCTATTCAATGGAGATAATACTATTTTTCTAACACAAACTATGGCTTTTGGTCCTTTGGCACGCTTTCAGGGAATAATGTATGACTATATTCGTTTAGAAGGTCCTGATTCTTGTTCTTCATATTAA 1871 0.411 LLEDTNGGLVILSSGLSLSKLISSLLLLHSTSQGTLLILSPSSATLKSKINFHLKTLNPQFYQVPVEITADLPVNHRHSLYSSGSVCFITPRILIVDLLTNKLPASIISGLIILNAHSVSETSTEAFIVRIFRSLNRSAFVRVFSDRPQAMVSGFAKAERTMKCLHIRKLHLWPRFQVYVSQELEQDPSDVVDIRVPMSKYMMGIQKAIVEVMGACLKEMRKTNKVDVEDLTVENGLFKSFDEIEFVKHLESTATSNEDVEYKYLPSCPDDEPQKKINQGTILSNIQWKKFGLLCFVWIAVLLLQIAKNYTATCSIKYWLLTLLQTPVTVGVSMYQAIGLYQGKKITVSKQDHGTHWPLHLLIVSLSCALLAGILGGLLGVGSGFVMGPLFIEFGIAPQVASATATLGMTFTASISVAQYFLLNRFPVPYALYLTIVATIAAYIGQKIIDRLVNIFQRASLIIFVLSFTILVSAIALGIGSMACGKDWFYAQVTRKKNEDIYEGTTWQIKFNLDDVEKDEIYKLRLALASANVSELQVRVNSVKQDPPIFSTGVIGKDYAIGRHGIHGLYWLFNIDVPSLLLFNGDNTIFLTQTMAFGPLARFQGIMYDYIRLEGPDSCSSY* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4071 622 PANTHER CEREBLON 245 478 - -
Psa7g4071 622 CDD RGL4_C 479 614 - -
Psa7g4071 622 Gene3D - 473 614 - -
Psa7g4071 622 Pfam Sulfite exporter TauE/SafE 326 466 IPR002781 GO:0016021
Psa7g4071 622 Pfam Polysaccharide lyase family 4, domain III 479 613 IPR029411 -
Psa7g4071 622 SUPERFAMILY Galactose-binding domain-like 484 614 IPR008979 -
Psa7g4071 622 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 245 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4071 Psa-Chr7 334600623 334603630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4071 416 616 Polysaccharide Lyase AT4G24430 48.780 8.74e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4071 K10848 - gmx:100812359 378.637