Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4069 GTAGGTGGTCCATCATGGACAGTGAACTTGGAAGAAGAGATTCTACTACAGAGCAAAAAGTTTGGCCAATACGGACTTCCATCTTTACCGACGATCTTCAAACTCTTATATACTAAATTTACTATTAAAGGTCTCACTGCCAAAGACATGGTTGCTCTATCTGGTGCCCACACAATCGGACAAGCTCAATGCTTTACATTTCGTGATAGGAATATACAAACAATGCAAGTGACATAG 237 0.4008 VGGPSWTVNLEEEILLQSKKFGQYGLPSLPTIFKLLYTKFTIKGLTAKDMVALSGAHTIGQAQCFTFRDRNIQTMQVT* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4069 78 ProSitePatterns Peroxidases proximal heme-ligand signature. 49 59 IPR019793 -
Psa7g4069 78 Gene3D Peroxidase, domain 2 27 74 - -
Psa7g4069 78 PRINTS Haem peroxidase superfamily signature 2 14 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 PRINTS Haem peroxidase superfamily signature 49 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 ProSiteProfiles Plant heme peroxidase family profile. 1 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 PANTHER PEROXIDASE 1 71 - -
Psa7g4069 78 Pfam Peroxidase 31 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 Gene3D - 2 26 - -
Psa7g4069 78 SUPERFAMILY Heme-dependent peroxidases 22 72 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 PRINTS Plant peroxidase signature 2 17 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 PRINTS Plant peroxidase signature 48 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g4069 78 PANTHER PEROXIDASE 72-RELATED 1 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4069 Psa-Chr7 334534387 334534699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4069 1 70 Peroxidase AT1G14550 47.222 1.14e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4069 K00430 - rcu:8283296 78.1814