Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4053 ATGTCGCGCCAGTCGACGGGTTCCGCTTTCACCAAATCCAAGACCCTTGATAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCCTTGAAGACCAAGAGTCACCTGCATATAGTACTTGAGTATGTGGAGAACGGCTCACTTGCGAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTGGTTGCAGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTACCTACACGAACAAGGTGTTATCCATCGTGATATTAAGGGTGCAAATATATTGACAACTAAAGAGGTAACTTTTTTATTTATTTATGGTTCTATTGCATACTTGGGCTTTGCATTTTAG 519 0.3892 MSRQSTGSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEVTFLFIYGSIAYLGFAF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4053 172 Gene3D Transferase(Phosphotransferase) domain 1 16 161 - -
Psa7g4053 172 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 155 - -
Psa7g4053 172 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Psa7g4053 172 Pfam Protein kinase domain 21 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4053 172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Psa7g4053 172 SUPERFAMILY Protein kinase-like (PK-like) 12 155 IPR011009 -
Psa7g4053 172 ProSiteProfiles Protein kinase domain profile. 20 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4053 172 PANTHER MAP3K EPSILON PROTEIN KINASE 1 6 155 - -
Psa7g4053 172 SMART serkin_6 20 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4053 Psa-Chr7 333453627 333458854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4053 1 155 MAP Kinase Kinase Kinase AT3G13530 93.548 3.46e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Psa7g4053 Pkinase 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4053 - - gmx:100813256 300.827