Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4039 ATGGAAGACGGTGAACTTGATTTCTCGAATCAGGATGTTTTTCCGAATCCAAACATGGCTGAATTTCCGAGTAGTGGTTCAATGGACAGTTTCTTTGATGAACTGTTGAAAGATACACACGCTTGTACTCATACGCACACGTGTAATCCACCTGGTCCTGATTCTTCGCACACTCATACTTGTTATCATGTTCATACCAAAATTGTGCCTGCATCTGAAGAAGATCAGGTTGGTACTGATGATACTGCTGAGTCTTCTGAGAAGAAGTCCAAGAAACGTCCGGTGGGGAATAAAGAAGCTGTTCGGAAGTATCGTGAGAAGAAAAAGGCTAGGGCTGCCTCGTTGGAAGACGAGGTTACGAAATTGAGGGCTTTGAATCAGCACTTAATGAGGAAGTTGCAGGGACAGGCTGCTTTAGAGGCTGAAGTGGCTAGATTGAAGTGTTTGTTGGTTGATATTAGGGGGAGGATTGAAGGGGAAATTGGATCCTTTCCGTATCAAAAACCAACTAATCCCAACCCCTCAATTCCGAACTTGCCTGGTTCTTATGTCATGAATCCTTGTAATGTGCAGTGTGACGATCGTGTCTATTGCCATGGTCCTGGAGCAGATGGGAGGTTTGCTGCAGAAGGGGTGTCACCAAATGAGGAAGCATTTGATGGTTGTGAATTTGAAAGTCTCCAGTGTCTCGGAGGCCAGAATTTGGGGCTCAAAGATCTTCATGGTTGTGGAGTTGGACCGACAATGTCTAATGTTAATTCTCAATCTTCCAATAAAAGAAAAGGGGGATCTCGTGCAGCAAAAGCTGGATGA 813 0.4465 MEDGELDFSNQDVFPNPNMAEFPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDSSHTHTCYHVHTKIVPASEEDQVGTDDTAESSEKKSKKRPVGNKEAVRKYREKKKARAASLEDEVTKLRALNQHLMRKLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPTNPNPSIPNLPGSYVMNPCNVQCDDRVYCHGPGADGRFAAEGVSPNEEAFDGCEFESLQCLGGQNLGLKDLHGCGVGPTMSNVNSQSSNKRKGGSRAAKAG* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4039 270 Coils Coil 98 132 - -
Psa7g4039 270 MobiDBLite consensus disorder prediction 72 109 - -
Psa7g4039 270 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Psa7g4039 270 SMART brlzneu 84 152 IPR004827 GO:0003700|GO:0006355
Psa7g4039 270 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Psa7g4039 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Psa7g4039 270 Gene3D - 78 153 - -
Psa7g4039 270 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 241 - -
Psa7g4039 270 PANTHER BASIC LEUCINE ZIPPER 23 1 241 - -
Psa7g4039 270 MobiDBLite consensus disorder prediction 81 103 - -
Psa7g4039 270 MobiDBLite consensus disorder prediction 251 270 - -
Psa7g4039 270 CDD bZIP 91 144 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4039 1 269 bZIP Transcription Factor Family AT4G35040 62.731 4.94e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g4039 bZIP_2 8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4039 K25785 - gmx:780549 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4039 7 332601218 332604419 Psa7g4039 7 332601218 332604419 ECH