Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4020 ATGGCAGACAGTGTGGTTTCATTCCTTTTGGAACACTTGTCCCAATTGCTGCAGCGCGAAGCTAATTTGCTGTGTGGAGTGGAAGACAGAATCATATCCCTCCGTAATGAACTTGAAATCATATGCGTATACACTTCTTCTGAAGGGAAGAACAACAACAACAACAAACAGATTGAACAAAAGGTTCTGAGTCAGATCAGAGATGTCTCCCACTTAGCCGAGGATGTCATCGACACATTCGTAGCCAATGTTGCCATCTATAAGAAGAAAAACATGCTGGAACGAATGTGTCACAGCGTTAATCATGCAAAGTTGCTCCGCGATGCAGCAGAGAAAATTGACAAGATCAAAACCACACTCAATGAGATACATGAAAACAAGATCAAATACTATCAAGAAAGCAGTGATCAATCAACATCAGCAACAGAAGAGGAGAATAGAATGAAATCACTTCACAGATTAAGAAGAAACGTGGAGGAAGAAAATGTAGTGGGCTTTGTCCATGAATCTGAGGTAGTCATCAATAGACTCGTAGAGGGCGGTTCGCCGCGACTTAAAGCTGTTTCAATTATTGGTATGGGTGGATTGGGCAAAACCACCCTGGCACGAAAAGTCTTTAACAGTGATGAGGTAAAGAAACACTTCAATTGCCGCGCATGGGTTTATGTGTCAAATGAATGTAGGGCCAGAGAGCTTTTGCTTGGTCTTCTTCAAAATTTGATGCCAAACAATGATTACGAAGGTAGAAGCTTAAGTGATGATGAGCTGAAGAAAAGAGTGAGGGAATGCTTGAAGTGGAAAAAGTATCTGTTGGTTCTTGATGACTTGTGGAAAATACGAGATTGGGATGAACTAAAAGATGTTTTTCCCGATGGAAATAGAGGAAGCAGAATATTGATAACCAGTCGTTTGAAAGAAGTTGCCTCGCATACCGGTCGAGATCCTCCTTTCTTTCTTCGATTTCTCAGTGAAGAACAAAGTTGGGAGCTCTTTTCCAAAAAAGCATTTAGAGGAGAAGAGTACCCTTGTGATCTTGAGTCTCTAGGTAAACAAATAGTTAAAAGTTGTGGCGGTTTGCCACTCTCAATTGTGGTTCTTGCAGGACTTCTGGCAAATAAGGAAAAGTCACACAGAGAATGGTCCAAAGTGTTGGGTCATGTTAACTGGTATCTTACCCGAGACGAAATAAAGGATGTGTACTTTAAACTCAGTTCGACACTTGCCTTCAAGACTGAAACCGTGTTTCTGTATTTAGGGATATTCCTGAAGATCTGA 1275 0.4118 MADSVVSFLLEHLSQLLQREANLLCGVEDRIISLRNELEIICVYTSSEGKNNNNNKQIEQKVLSQIRDVSHLAEDVIDTFVANVAIYKKKNMLERMCHSVNHAKLLRDAAEKIDKIKTTLNEIHENKIKYYQESSDQSTSATEEENRMKSLHRLRRNVEEENVVGFVHESEVVINRLVEGGSPRLKAVSIIGMGGLGKTTLARKVFNSDEVKKHFNCRAWVYVSNECRARELLLGLLQNLMPNNDYEGRSLSDDELKKRVRECLKWKKYLLVLDDLWKIRDWDELKDVFPDGNRGSRILITSRLKEVASHTGRDPPFFLRFLSEEQSWELFSKKAFRGEEYPCDLESLGKQIVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDEIKDVYFKLSSTLAFKTETVFLYLGIFLKI* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4020 424 PRINTS Disease resistance protein signature 187 202 - -
Psa7g4020 424 PRINTS Disease resistance protein signature 263 277 - -
Psa7g4020 424 PRINTS Disease resistance protein signature 356 370 - -
Psa7g4020 424 Gene3D - 321 404 IPR042197 -
Psa7g4020 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 418 IPR027417 -
Psa7g4020 424 Coils Coil 106 126 - -
Psa7g4020 424 PANTHER DISEASE RESISTANCE PROTEIN RP 52 421 IPR044974 GO:0006952
Psa7g4020 424 CDD RX-CC_like 2 123 IPR038005 -
Psa7g4020 424 Pfam NB-ARC domain 171 388 IPR002182 GO:0043531
Psa7g4020 424 Gene3D - 144 314 IPR027417 -
Psa7g4020 424 PANTHER - 52 421 - -
Psa7g4020 424 Gene3D - 5 108 - -
Psa7g4020 424 Pfam Rx N-terminal domain 5 85 IPR041118 -
Psa7g4020 424 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4020 Psa-Chr7 331186601 331190720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4020 174 423 WRKY Transcription Factor Family AT5G45050 24.803 3.31e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4020 - - gmx:100814688 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4020 7 331186601 331190720 Psa7g4020 7 331186601 331190720 ECH