Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4019 ATGGCAGATAACGTGGTTGCATTCCTTTTGGAACACTTATCCCAATTGCTGCAACGCGAAGCTAATTTGCTGTGTGGAGTGGAAGACAAAATCATATCCCTTCGTAACGAACTTGAAATCATAAACATATATCTCAAAACTTCTTCCGAAGGGAAGATCAACAGCAACAACAGAGAAATAGAACAAAAGGTTCTGAGTCAGATCAGAGATGTCTCCTACTTAGCCGAGGATGTCATCGACACATTCATCACCAATGTCGCCTTCTACAAGAAGAGAAACGTGATGGGAAGAATGCTTCACAGCGTTGATCACGCAAAGTTGCTCCACGACTTAGCAGAGAAAATTGACAAGATCAAAACCGCACTCAGCGAGATACACGAAAACAAGATCAAATACTGTCAAGAAAGCAGTGATCAATCAAGATCAGCAAGAGAAGAGGAGGAGAGAGCGCAATCACTTCACAGATTAAGAAGAAACGTGGAGGAGGAAAATGTAGTGGGCTTTGTCCATGAATCTGAAGTAGTCATCAATAGACTCGTCCTGGATGGTTCGTCACCATTCAATGTCGTTTCAATCATTGGTATGGGTGGATTGGGCAAAACCACCCTGGCACGAAAAGTCTATAACAGTCATAAGGTGAAGAATCACTTCAATTGCCGCGCATGGGTTTGTGTGTCAAACGAATGTAGGGCCAGAGAGCTTTTGCTTGGTCTTTTTCAAAATTTGATGCCAAACAATGATTACGAAGGTAGAAGCTTAAGTGATGCTGAGCTGAAGAAAAGAGTGTGGGAATGCTTAAAGTGGAAAAAGTATCTGTTGGTTCTTGATGACTTGTGGAAAATACGAGATTGGGATGAACTAAAAGATGCTTTTCCCGATGGAAATAGAGGAAGCAGAATATTGATAACAAGTCGTTTGAAAGAAGTTGCCTCGCATACCGGTCGAGATCCTCCTTTCTTTCTTCAATTTCTCAGTGAAGAACAAAGTTGGGAGCTCTTTTCTAAAAAAGTGTTTAGAGGAGAAGAGTACCCTTGTGATCTTGAGTCTCTAGGTAAACAAATAGTTAAAAGTTGCGGCGGTTTGCCACTCTCAATTGTGGTTCTTGCAGGACTTCTGGCAAATAAGGAAAAGTCACACAGAGAATGGTCCAAAGTGTTGGGTCATGTTAACTGGTATCTTACCCGAGACGAGACTCAAGTAAAGGATGTTGTTCTTAAACTCAGTTTCGACAACTTACCTTCAAGATTGAAACCATGTTTTCTGTATTTAGGGATGTTCCCTGAAGATTGCGAAATACATGTAAAGAAGTTGTTGCAACTATGGATGGCTGAAGGATTTATACAAGAAACCGGAAGTAGAGATGCATGTGATGTTGCTGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGAAATATAACAGAGGCGTGAGAACATGCCGCATCCATGATCTTCTCAGAGATCTCTGCATATTAGAGAGCAAAGAGGATAATATTTTTCAAGTTTGCACTGACAACAACATTTTAATCCCTACAAAACCTCGTAGATTGTCTGTCCATTCTGTTATGGATGTCTATATTTTTTCAAACACTAATGATCATTCAAGTGTTCGTTCTTTGCTTGGTTCAAACCGGGATTGTGTCCTTTCTCACCGCCAGTGGAAATGGCTTACCAAAGGCTTCAAATTGGTCCGAGTGTTAGATCTTGAGGGGATATGTTGTTTTAAGATTCCGGCTTACTTAGAGAACTTCATTCACTTGAGGTACTTAAGAGTAAAGTCACCATGTATTACAAGTGTTCCAGATTCTATATGTAACCTTCAGAATCTACAAACAGTAGACTTTGGACGTTCATCAGAGAAGAACATGTCAGTTTCTTTCCCCATTGGAATATCACAGCTCAAGCATTTAGGGCACGTGTATACTTATTGTCCTATCATGCTACGTGGTCGTTGTTCAGAATCAAATGGCAATGTTATGTGGAATCTTCATACAATCTCTTTCATAGTACTGAACAAAAAAACAACATATCTGATAGAGAAAAAAAGTTTCCCAAAACTAAGAAAATTAGGATTGTTTATCTCCTCAAAGTTCAATGGTGATGTACCCAAAATGCTGCTGAGCCTACAACAACTGAAACATTTGAATAAGCTAGAAATCAAGTTCGGCCTGAAAGATTATCTAGATCTGCGATGGGATATCAATTGTAAGCCCGCGGAAGTTTTAGAAAGTTTGAAGCAGTTGAGCCATCTGAGTATACTGAAAATTATGAATGCATGTGAGGTTGTAAAATGTGTAACCATGTTTCCTCCCAACATTACCAAGTTAACATTGAGAGGTCTTACTTGTTTGAATGACACTGGAATAAAGACTATTGGAAATCTCACCAAACTCCAAAAGTTGATCTTATCTGGAAAATACAAACGGAGTGTTAACTTTTGGTCTTCAGATTCAGTTTATGATCTTAATTGTGTTGAAGATGGGTTCCCACAGCTGCAGGAGTTTCATATGAAAGATTTACATATCCGAAGCTGGAAATTAGGTAATGGTTCAATGCCACACCTTCAAATCCTTGATATTCAAAGATGTAGTAAGTTGGATAGCCTCCCAAGTGAATTATGGTCTTTGACTACCTTAAAAAAAGTATGTGTTTGGAGACCCTCCAATGCTATGGCTGCAATGCTACACAATTTGGAAGTTAGGAAAGGATGTGAACTTATTGTAGAGTAA 2748 0.3941 MADNVVAFLLEHLSQLLQREANLLCGVEDKIISLRNELEIINIYLKTSSEGKINSNNREIEQKVLSQIRDVSYLAEDVIDTFITNVAFYKKRNVMGRMLHSVDHAKLLHDLAEKIDKIKTALSEIHENKIKYCQESSDQSRSAREEEERAQSLHRLRRNVEEENVVGFVHESEVVINRLVLDGSSPFNVVSIIGMGGLGKTTLARKVYNSHKVKNHFNCRAWVCVSNECRARELLLGLFQNLMPNNDYEGRSLSDAELKKRVWECLKWKKYLLVLDDLWKIRDWDELKDAFPDGNRGSRILITSRLKEVASHTGRDPPFFLQFLSEEQSWELFSKKVFRGEEYPCDLESLGKQIVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDETQVKDVVLKLSFDNLPSRLKPCFLYLGMFPEDCEIHVKKLLQLWMAEGFIQETGSRDACDVAEDYLYELIDRSLIQVARVKYNRGVRTCRIHDLLRDLCILESKEDNIFQVCTDNNILIPTKPRRLSVHSVMDVYIFSNTNDHSSVRSLLGSNRDCVLSHRQWKWLTKGFKLVRVLDLEGICCFKIPAYLENFIHLRYLRVKSPCITSVPDSICNLQNLQTVDFGRSSEKNMSVSFPIGISQLKHLGHVYTYCPIMLRGRCSESNGNVMWNLHTISFIVLNKKTTYLIEKKSFPKLRKLGLFISSKFNGDVPKMLLSLQQLKHLNKLEIKFGLKDYLDLRWDINCKPAEVLESLKQLSHLSILKIMNACEVVKCVTMFPPNITKLTLRGLTCLNDTGIKTIGNLTKLQKLILSGKYKRSVNFWSSDSVYDLNCVEDGFPQLQEFHMKDLHIRSWKLGNGSMPHLQILDIQRCSKLDSLPSELWSLTTLKKVCVWRPSNAMAAMLHNLEVRKGCELIVE* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4019 915 Pfam Rx N-terminal domain 5 86 IPR041118 -
Psa7g4019 915 Gene3D - 148 316 IPR027417 -
Psa7g4019 915 Coils Coil 143 163 - -
Psa7g4019 915 Pfam NB-ARC domain 173 409 IPR002182 GO:0043531
Psa7g4019 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 423 IPR027417 -
Psa7g4019 915 PRINTS Disease resistance protein signature 189 204 - -
Psa7g4019 915 PRINTS Disease resistance protein signature 265 279 - -
Psa7g4019 915 PRINTS Disease resistance protein signature 358 372 - -
Psa7g4019 915 PRINTS Disease resistance protein signature 856 872 - -
Psa7g4019 915 Gene3D Ribonuclease Inhibitor 518 910 IPR032675 -
Psa7g4019 915 CDD RX-CC_like 2 125 IPR038005 -
Psa7g4019 915 Gene3D - 323 408 IPR042197 -
Psa7g4019 915 Gene3D - 5 121 - -
Psa7g4019 915 Coils Coil 108 128 - -
Psa7g4019 915 SUPERFAMILY L domain-like 487 891 - -
Psa7g4019 915 Gene3D - 409 498 IPR036388 -
Psa7g4019 915 PANTHER - 54 912 - -
Psa7g4019 915 PANTHER DISEASE RESISTANCE PROTEIN RP 54 912 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4019 Psa-Chr7 331162787 331166001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4019 171 495 WRKY Transcription Factor Family AT5G45050 25.076 2.53e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4019 - - gmx:100814688 1076.62